Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.8534
E230015J15Rik
RIKEN cDNA E230015J15 gene
11
319954
Mm.8534
Egfr
epidermal growth factor receptor
11
11 9.0 cM
13649
Gene Ontology
ATP binding
|
cell growth and/or maintenance
|
cell proliferation
|
cellular morphogenesis
|
cytoskeleton
|
EGF receptor signaling pathway
|
endocytic vesicle
|
endosome
|
epidermal growth factor receptor activity
|
extracellular space
|
integral to membrane
|
integral to plasma membrane
|
intracellular
|
kinase activity
|
membrane
|
plasma membrane
|
protein amino acid phosphorylation
|
protein binding
|
protein kinase activity
|
protein serine/threonine kinase activity
|
protein-tyrosine kinase activity
|
receptor activity
|
regulation of cell cycle
|
regulation of peptidyl-tyrosine phosphorylation
|
signal transducer activity
|
signal transduction
|
transferase activity
|
transmembrane receptor protein tyrosine kinase activity
|
transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog
EGFR[epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAGAAA
TTGTGGTGAC (
2
)
4.9
0.0049
Cb medulloblastoma
AAAAAAGAAA
TTGTGGTGAC (
2
)
13.8
0.0138
P8 GC+1d culture
AAAAAAGAAA
GCTTGGGGGC
(
2
)
TTGATCACAG
(
2
)
TTGTGGTGAC (
2
)
18.2
0.0182
P8 GC+SHH+1d culture
AAAAAAGAAA
TTGATCACAG
(
2
)
TTGTGGTGAC (
2
)
10.5
0.0105
E15 cortex
TTGTGGTGAC (
2
)
4.9
0.0049
P1 cortex
TTGTGGTGAC (
2
)
4.5
0.0045
Hypothalamus
AAGTAAACAA
TTGTGGTGAC (
2
)
9
0.009
E12.5 retina
TTGTGGTGAC (
2
)
3.8
0.0038
E14.5 retina
TTGTGGTGAC (
2
)
7.3
0.0073
E16.5 retina
GCTTGGGGGC
(
2
)
TTGTGGTGAC (
2
)
18.1
0.0181
E18.5 retina
AAGTAAACAA
TTGTGGTGAC (
2
)
10.9
0.0109
P0.5 retina
TTGTGGTGAC (
2
)
7.9
0.0079
P2.5 retina
AAAAAAGAAA
TTGTGGTGAC (
2
)
17.6
0.0176
P4.5 retina
AAAAAAGAAA
TTGTGGTGAC (
2
)
21.8
0.0218
P6.5 retina
AAAAAAGAAA
AAGTAAACAA
TTGTGGTGAC (
2
)
15.1
0.0151
P10.5 crx- retina
AAAAAAGAAA
TTGTGGTGAC (
2
)
11.2
0.0112
P10.5 crx+ retina
TTGTGGTGAC (
2
)
23.1
0.0231
Adult retinal
GCTTGGGGGC
(
2
)
TTGATCACAG
(
2
)
TTGTGGTGAC (
2
)
11.2
0.0112
ONL
AAAAAAGAAA
TTGTGGTGAC (
2
)
9.5
0.0095
