Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.85544	Tcfap2a	transcription factor AP-2, alpha	13	13 25.0 cM	21418
Gene Ontology	DNA binding | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	TFAP2A[transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTCCCCTCC (2) 1.6 0.0016 Cb medulloblastoma GATGTAGCCC GGGAGAAAAA (6) 6.9 0.0069 P8 GC+1d culture GATGTAGCCC GGGAGAAAAA (6) 3.4 0.0034 P8 GC+SHH+1d culture GATGTAGCCC GGGAGAAAAA (6) 3.5 0.0035 3T3 fibroblasts GATGTAGCCC GGAACGCCAG 7 0.007 E15 cortex TGTCCCCTCC (2) 4.9 0.0049 Hypothalamus TCATTCCTTT 1.8 0.0018 E12.5 retina GATGTAGCCC GGGAGAAAAA (6) TCATTCCTTT 5.7 0.0057 E14.5 retina GGGAGAAAAA (6) 1.8 0.0018 E16.5 retina GGGAGAAAAA (6) 1.8 0.0018 P0.5 retina TGTCCCCTCC (2) TTAAACGATT (2) 4 0.004 P2.5 retina GATGTAGCCC GGAACGCCAG TGTCCCCTCC (2) TTAAACGATT (2) 7.2 0.0072 P4.5 retina TGTCCCCTCC (2) TTAAACGATT (2) 6 0.006 P6.5 retina TCATTCCTTT TTAAACGATT (2) 3.4 0.0034 P10.5 crx- retina GGAACGCCAG 3.7 0.0037 Adult retinal GGAACGCCAG TCATTCCTTT 3.8 0.0038 ONL GGAACGCCAG GGGAGAAAAA (6) 3.8 0.0038