Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.86343	Taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	2		209361
Gene Ontology	protein binding | RNA polymerase II transcription factor activity | transcription factor TFIID complex | transcription from Pol II promoter
Human Homolog	TAF3[TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGTGCCCT CGTGAAGGCT GTGGTTGAAA TGAAAATATT (2) 16.3 0.0163 Cb medulloblastoma GTGGTTGAAA 4.6 0.0046 P8 GC+1d culture CAGGTGCCCT GTGGTTGAAA TAGTTTCCAC TCCTGTCCAC TGAAAATATT (2) TTGCTGAAAG (2) 15.8 0.0158 P8 GC+SHH+1d culture CAGGTGCCCT GTGGTTGAAA TTGCTGAAAG (2) 12.9 0.0129 E15 cortex CTGCCGGCCT GTGGTTGAAA 49.4 0.0494 P1 cortex GTGGTTGAAA TAGTTTCCAC 13.6 0.0136 Hypothalamus CTGCCGGCCT GTGGTTGAAA 16.3 0.0163 E12.5 retina GTGGTTGAAA TTGCTGAAAG (2) 35.7 0.0357 E14.5 retina GTGGTTGAAA TGAAAATATT (2) TTGCTGAAAG (2) 29.1 0.0291 E16.5 retina CGTGAAGGCT CTGCCGGCCT GTGGTTGAAA TGAAAATATT (2) 28.9 0.0289 E18.5 retina GTGGTTGAAA TAGTTTCCAC TCCTGTCCAC TGAAAATATT (2) 72.7 0.0727 P0.5 retina GTGGTTGAAA TAGTTTCCAC 19.7 0.0197 P2.5 retina CAGGTGCCCT CTGCCGGCCT GTGGTTGAAA TGAAAATATT (2) TTGTTCATTG 31.8 0.0318 P4.5 retina CTGCCGGCCT GTGGTTGAAA TGAAAATATT (2) 25.8 0.0258 P6.5 retina CTGCCGGCCT GTGGTTGAAA TAGTTTCCAC TGAAAATATT (2) 20 0.02 P10.5 crx- retina GTGGTTGAAA TGAAAATATT (2) TTGTTCATTG 11.2 0.0112 P10.5 crx+ retina GTGGTTGAAA TCCTGTCCAC TGAAAATATT (2) 9.5 0.0095 Adult retinal CAGGTGCCCT CTGCCGGCCT GTGGTTGAAA 7.5 0.0075