| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAGTCAGGCT CGAAAAAAAA (2) GGGACAGCGT (2) TACCCACACA (3) TGTGCTTGTC (2) TTCTTGGAAG (2) TTCTTGTAAG (3) TTGATAATAA (2)
| 21.1 | 0.0211 |
| Cb medulloblastoma | CAGTCAGGCT CGAAAAAAAA (2) TACCCACACA (3)
| 9.2 | 0.0092 |
| P8 GC+1d culture | TACCCACACA (3) TGGTTAACCA TGTGCTTGTC (2) TGTGCTTTGT (2) TTCTTGTAAG (3) TTGATAATAA (2)
| 12.4 | 0.0124 |
| P8 GC+SHH+1d culture | ATATGAGTAA (2) CGAAAAAAAA (2) GGGACAGCGT (2) TGTGCTTGTC (2) TTCTTGTAAG (3)
| 16.5 | 0.0165 |
| 3T3 fibroblasts | GGGACAGCGT (2)
| 3.5 | 0.0035 |
| E15 cortex | CGAAAAAAAA (2)
| 14.8 | 0.0148 |
| P1 cortex | CAGTCAGGCT TTCTTGGAAG (2)
| 9 | 0.009 |
| Hypothalamus | GAGCCTGAGG (2) GGGACAGCGT (2) TGGTTAACCA
| 7.2 | 0.0072 |
| E12.5 retina | ATATGAGTAA (2) CAGTCAGGCT CGAAAAAAAA (2) TACCCACACA (3) TGTGCTTGTC (2)
| 11.4 | 0.0114 |
| E14.5 retina | CGAAAAAAAA (2) TGTGCTTTGT (2) TTCTTGGAAG (2) TTCTTGTAAG (3) TTGATAATAA (2)
| 9 | 0.009 |
| E16.5 retina | CGAAAAAAAA (2) GAGCCTGAGG (2) TGTGCTTTGT (2) TTCTTGTAAG (3)
| 9 | 0.009 |
| E18.5 retina | CGAAAAAAAA (2) TACCCACACA (3) TTCTTGTAAG (3) TTGATAATAA (2)
| 9 | 0.009 |
| P0.5 retina | CGAAAAAAAA (2) TTCTTGGAAG (2) TTCTTGTAAG (3)
| 13.8 | 0.0138 |
| P2.5 retina | CGAAAAAAAA (2) GAGCCTGAGG (2) TACCCACACA (3) TGTGCTTGTC (2) TTCTTGTAAG (3) TTGATAATAA (2)
| 21.1 | 0.0211 |
| P4.5 retina | CGAAAAAAAA (2) TTCTTGTAAG (3) TTGATAATAA (2)
| 19.9 | 0.0199 |
| P6.5 retina | CGAAAAAAAA (2) TACCCACACA (3) TGTGCTTGTC (2) TTGATAATAA (2)
| 6.8 | 0.0068 |
| P10.5 crx- retina | TACCCACACA (3) TTCTTGTAAG (3)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | CAGTCAGGCT CGAAAAAAAA (2) GAGCCTGAGG (2) TACCCACACA (3) TGGTTAACCA TTCTTGTAAG (3) TTGATAATAA (2)
| 19 | 0.019 |
| Adult retinal | TACCCACACA (3) TTCTTGTAAG (3)
| 5.6 | 0.0056 |
| ONL | ATATGAGTAA (2) TTCTTGTAAG (3) TTGATAATAA (2)
| 7.6 | 0.0076 |