| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAATAAATGT (3) GTTTTTATCC (2) TGCATCTTCT
| 18 | 0.018 |
| Cb medulloblastoma | AAATAAATGT (3) TACAGCCTGC TGCATCTTCT TGGCTCACAA (2)
| 16.1 | 0.0161 |
| P8 GC+1d culture | AAATAAATGT (3) TGGCTCACAA (2)
| 14.8 | 0.0148 |
| P8 GC+SHH+1d culture | AAATAAATGT (3) TACAGCCTGC TGCTTTTTTT (2) TGGCTCACAA (2)
| 11.7 | 0.0117 |
| 3T3 fibroblasts | TGGCTCACAA (2)
| 3.5 | 0.0035 |
| E15 cortex | TACAGCCTGC TGCTTTTTTT (2) TGGCTCACAA (2)
| 29.6 | 0.0296 |
| P1 cortex | TGGCTCACAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | AAATAAATGT (3) TGGCTCACAA (2)
| 25.3 | 0.0253 |
| E12.5 retina | AAATAAATGT (3) TACAGCCTGC TGGCTCACAA (2)
| 13.1 | 0.0131 |
| E14.5 retina | AAATAAATGT (3) TGCTTTTTTT (2) TGGCTCACAA (2)
| 9.1 | 0.0091 |
| E16.5 retina | AAATAAATGT (3) TACAGCCTGC TGCATCTTCT TGGCTCACAA (2)
| 14.5 | 0.0145 |
| E18.5 retina | AAATAAATGT (3) TGCTTTTTTT (2) TGGCTCACAA (2)
| 14.5 | 0.0145 |
| P0.5 retina | GTTTTTATCC (2) TGGCTCACAA (2)
| 4 | 0.004 |
| P2.5 retina | AAATAAATGT (3) TGGCTCACAA (2)
| 8.8 | 0.0088 |
| P4.5 retina | AAATAAATGT (3) TGCTTTTTTT (2) TGGCTCACAA (2)
| 10 | 0.01 |
| P6.5 retina | AAATAAATGT (3) TGGCTCACAA (2)
| 10 | 0.01 |
| P10.5 crx- retina | AAATAAATGT (3) TGCATCTTCT
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AAATAAATGT (3) TGCATCTTCT TGGCTCACAA (2)
| 17.3 | 0.0173 |
| Adult retinal | AAATAAATGT (3) TGCATCTTCT TGGCTCACAA (2)
| 11.2 | 0.0112 |
| ONL | AAATAAATGT (3) TACAGCCTGC TGGCTCACAA (2)
| 7.6 | 0.0076 |