Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.86482
AF233884
cDNA sequence AF233884
19
57753
Human Homolog
C10orf117[chromosome 10 open reading frame 117]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 29 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTAAGCAAGC
(
2
)
GTTTTTTTTT (
2
)
TGATCGAGAG
(
2
)
6.5
0.0065
Cb medulloblastoma
GTTTTTTTTT (
2
)
4.6
0.0046
P8 GC+1d culture
ACTCCTCCCT
GTTTTTTTTT (
2
)
2.2
0.0022
P8 GC+SHH+1d culture
ACTCCTCCCT
GTTTTTTTTT (
2
)
4.7
0.0047
3T3 fibroblasts
CTAAGCAAGC
(
2
)
3.5
0.0035
Hypothalamus
ACTCCTCCCT
CTAAGCAAGC
(
2
)
3.6
0.0036
E14.5 retina
GTTTTTTTTT (
2
)
TGATCGAGAG
(
2
)
3.6
0.0036
E18.5 retina
ACTCCTCCCT
GTTTTTTTTT (
2
)
3.6
0.0036
P0.5 retina
ACTCCTCCCT
GTTTTTTTTT (
2
)
TGATCGAGAG
(
2
)
7.9
0.0079
P4.5 retina
GTTTTTTTTT (
2
)
2
0.002
P6.5 retina
ACTCCTCCCT
5
0.005
P10.5 crx- retina
ACTCCTCCCT
GTTTTTTTTT (
2
)
TGATCGAGAG
(
2
)
7.5
0.0075
P10.5 crx+ retina
ACTCCTCCCT
CTAAGCAAGC
(
2
)
GTTTTTTTTT (
2
)
5.7
0.0057
Adult retinal
ACTCCTCCCT
3.7
0.0037
ONL
ACTCCTCCCT
CTAAGCAAGC
(
2
)
3.8
0.0038
