Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.86670	Tbpl1	TATA box binding protein-like 1	10		237336
Gene Ontology	acrosome formation | cytoplasm | DNA binding | dTTP biosynthesis | nucleus | regulation of transcription, DNA-dependent | RNA polymerase II transcription factor activity | spermatogenesis | spermatogenesis | transcription factor TFIID complex | transcription initiation from Pol II promoter
Human Homolog	TBPL1[TBP-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCGAGTCTG TGCACCATAT TTTCTGAACA 9.8 0.0098 Cb medulloblastoma GAGACCTGGG TCCCACAGGC (3) 4.6 0.0046 P8 GC+1d culture AAGCCTGTGG GAGACCTGGG GCCGAGTCTG GTGGGAACAA (2) TCCCACAGGC (3) TGCACCATAT 11.3 0.0113 P8 GC+SHH+1d culture AAGCCTGTGG GCCGAGTCTG TATATAAGCT (4) TCCCACAGGC (3) 12.9 0.0129 3T3 fibroblasts GCCGAGTCTG GTGGGAACAA (2) 7 0.007 E15 cortex CCCTTGAGAT (2) GCCGAGTCTG 9.8 0.0098 P1 cortex GTGGGAACAA (2) 9.1 0.0091 Hypothalamus GCCGAGTCTG TATATAAGCT (4) 3.6 0.0036 E12.5 retina GCCGAGTCTG GTGGGAACAA (2) TTTCTGAACA 9.5 0.0095 E14.5 retina TCCCACAGGC (3) 1.8 0.0018 E16.5 retina GCCGAGTCTG GTGGGAACAA (2) TCCCACAGGC (3) 9 0.009 E18.5 retina AAGCCTGTGG GCCGAGTCTG 3.6 0.0036 P0.5 retina GCCGAGTCTG GTGGGAACAA (2) TCCCACAGGC (3) 13.7 0.0137 P2.5 retina GCCGAGTCTG TTTCTGAACA 3.6 0.0036 P4.5 retina GCCGAGTCTG TATATAAGCT (4) 6 0.006 P6.5 retina CCCTTGAGAT (2) GCCGAGTCTG TATATAAGCT (4) 15 0.015 P10.5 crx- retina GAGACCTGGG GTGGGAACAA (2) 7.5 0.0075 P10.5 crx+ retina CCCTTGAGAT (2) GAGACCTGGG GCCGAGTCTG GTGGGAACAA (2) TGCACCATAT 13.4 0.0134 Adult retinal GCCGAGTCTG TGCACCATAT 3.8 0.0038