Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8687	Cap1	CAP, adenylate cyclase-associated protein 1 (yeast)	4		12331
Gene Ontology	actin cytoskeleton organization and biogenesis | ameboid cell migration | cellular morphogenesis | cortical actin cytoskeleton | cytoplasm | membrane | receptor mediated endocytosis
Human Homolog	CAP1[CAP, adenylate cyclase-associated protein 1 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGCACCAT (2) GGGAACAACT GGGGGCAGGA TGGACTGGTC (2) 9.7 0.0097 Cb medulloblastoma AAAGCACCAT (2) CATCACCACA (2) GGATACATCT GGGAACAACT 16.1 0.0161 P8 GC+1d culture AAAGCACCAT (2) CATCACCACA (2) CCACCACCAC (2) GGGAACAACT TGGACTGGTC (2) 10.1 0.0101 P8 GC+SHH+1d culture AAAGCACCAT (2) CATCACCACA (2) GGGAACAACT 10.5 0.0105 3T3 fibroblasts CCACCACCAC (2) GGATACATCT GGGAACAACT 14 0.014 E15 cortex GCTCCAACTG 9.9 0.0099 Hypothalamus AAAGCACCAT (2) CATCACCACA (2) GGGGGCAGGA 9 0.009 E12.5 retina AAAGCACCAT (2) AAGACTCACA (2) CATCACCACA (2) CCACCACCAC (2) GGATACATCT GGGAACAACT 15.2 0.0152 E14.5 retina AAAGCACCAT (2) AAGACTCACA (2) CATCACCACA (2) 5.4 0.0054 E16.5 retina AAAGCACCAT (2) CATCACCACA (2) GCTCCAACTG 5.4 0.0054 E18.5 retina GCCAAGTGTA GCTCCAACTG GGGAACAACT 7.2 0.0072 P0.5 retina AAGACTCACA (2) CCACCACCAC (2) GCCAAGTGTA GGATACATCT GGGAACAACT TGGACTGGTC (2) 12 0.012 P2.5 retina AAAGCACCAT (2) CCACCACCAC (2) 3.6 0.0036 P4.5 retina AAGACTCACA (2) CATCACCACA (2) GCTCCAACTG GGGAACAACT 8 0.008 P6.5 retina GGGAACAACT TGGACTGGTC (2) 3.4 0.0034 P10.5 crx- retina AAAGCACCAT (2) CATCACCACA (2) GCCAAGTGTA 16.8 0.0168 P10.5 crx+ retina AAAGCACCAT (2) AAGACTCACA (2) CATCACCACA (2) 7.6 0.0076 Adult retinal AAGACTCACA (2) CATCACCACA (2) CCACCACCAC (2) GGGGGCAGGA 9.4 0.0094 ONL AAAGCACCAT (2) AAGACTCACA (2) CATCACCACA (2) CCACCACCAC (2) GGGAACAACT 13.3 0.0133