Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.873	Snrp116	U5 small nuclear ribonucleoprotein	11		20624
Gene Ontology	GTP binding | nuclear mRNA splicing, via spliceosome | nucleus | protein binding | protein biosynthesis | ribonucleoprotein complex | spliceosome complex | translation elongation factor activity | translational elongation | viral nucleocapsid
Human Homolog	U5-116KD[U5 snRNP-specific protein, 116 kD]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGACAAAAA (3) AGGAGAGAAG GAATTTTATT (4) 14.6 0.0146 Cb medulloblastoma AGGAGAGAAG GAATTTTATT (4) 9.2 0.0092 P8 GC+1d culture AGGACAAAAA (3) ATGACCAGTA (7) GAATTTTATT (4) GCCACTCCCC (3) TACAATGAAC 7.9 0.0079 P8 GC+SHH+1d culture AGGACAAAAA (3) ATGACCAGTA (7) GAATTTTATT (4) GTGGAATTTT (2) TACAATGAAC 11.8 0.0118 E15 cortex GAATTTTATT (4) 14.8 0.0148 P1 cortex TACAATGAAC 4.5 0.0045 Hypothalamus GAATTTTATT (4) GCCACTCCCC (3) TAAGTCCTGA 7.2 0.0072 E12.5 retina AGGACAAAAA (3) ATGACCAGTA (7) GAATTTTATT (4) TACAATGAAC 7.6 0.0076 E14.5 retina AGGAGAGAAG GAATTTTATT (4) TAAGTCCTGA 16.4 0.0164 E16.5 retina AGGACAAAAA (3) GAATTTTATT (4) 9 0.009 E18.5 retina AGGAGAGAAG GAATTTTATT (4) GTGGAATTTT (2) TAAGTCCTGA 16.3 0.0163 P0.5 retina GAATTTTATT (4) 3.9 0.0039 P2.5 retina AGGACAAAAA (3) ATGACCAGTA (7) GAATTTTATT (4) GCCACTCCCC (3) 8.9 0.0089 P4.5 retina GAATTTTATT (4) GCCACTCCCC (3) 6 0.006 P6.5 retina GAATTTTATT (4) 3.3 0.0033 P10.5 crx- retina GAATTTTATT (4) TAAGTCCTGA TACAATGAAC 7.5 0.0075 P10.5 crx+ retina GAATTTTATT (4) 3.8 0.0038 Adult retinal AGGACAAAAA (3) TAAGTCCTGA 3.8 0.0038 ONL GAATTTTATT (4) 1.9 0.0019