| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AAAGAAAAAA (2) ATGATGGCAG (2)
| 216.9 | 0.2169 |
| Cb medulloblastoma | AAAAAAAAAA (2) AAAGAAAAAA (2) TGGATGAAAA
| 816.3 | 0.8163 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAAGAAAAAA (2) GTTTTCTTAA TGACATTCAG
| 214.5 | 0.2145 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAAGAAAAAA (2) ATGATGGCAG (2) GTGCTTGTAC
| 294 | 0.294 |
| 3T3 fibroblasts | AAAAAAAAAA (2) ATGATGGCAG (2)
| 31.5 | 0.0315 |
| E15 cortex | AAAAAAAAAA (2) AAAGAAAAAA (2)
| 217.7 | 0.2177 |
| P1 cortex | AAAAAAAAAA (2) AAAGAAAAAA (2)
| 254.5 | 0.2545 |
| Hypothalamus | AAAAAAAAAA (2) AAAGAAAAAA (2) CACACACTGG GTGCTTGTAC
| 137.7 | 0.1377 |
| E12.5 retina | AAAAAAAAAA (2)
| 138.9 | 0.1389 |
| E14.5 retina | AAAAAAAAAA (2) ATGATGGCCA
| 96.5 | 0.0965 |
| E16.5 retina | AAAAAAAAAA (2) AAAGAAAAAA (2)
| 47.1 | 0.0471 |
| E18.5 retina | AAAAAAAAAA (2) AAAGAAAAAA (2) TGACATTCAG
| 387.4 | 0.3874 |
| P0.5 retina | AAAAAAAAAA (2) AAAGAAAAAA (2) ATGATGGCAG (2)
| 127.7 | 0.1277 |
| P2.5 retina | AAAAAAAAAA (2) AAAGAAAAAA (2)
| 337.9 | 0.3379 |
| P4.5 retina | AAAAAAAAAA (2) AAAGAAAAAA (2)
| 289.2 | 0.2892 |
| P6.5 retina | AAAAAAAAAA (2) AAAGAAAAAA (2) ATGATGGCCA GTGCTTGTAC TGACATTCAG TGGATGAAAA
| 283.6 | 0.2836 |
| P10.5 crx- retina | AAAAAAAAAA (2) CACACACTGG
| 46.5 | 0.0465 |
| P10.5 crx+ retina | AAAAAAAAAA (2)
| 96.1 | 0.0961 |
| Adult retinal | AAAAAAAAAA (2) GTGCTTGTAC
| 59.3 | 0.0593 |
| ONL | AAAAAAAAAA (2) AAAGAAAAAA (2) GTTTTCTTAA TGGATGAAAA
| 114.8 | 0.1148 |