Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8739	Sgce	sarcoglycan, epsilon	6	6 1.0 cM	20392
Gene Ontology	calcium ion binding | cytoskeleton | extracellular space | integral to membrane | integral to plasma membrane | protein binding | sarcoglycan complex
Human Homolog	SGCE[sarcoglycan, epsilon]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCACTGTGT CCTGTCTACT TGCTGCCCGC 9.7 0.0097 Cb medulloblastoma CCCACTGTGT CCTGTCTACT TGCTGCCCGC 11.5 0.0115 P8 GC+1d culture CCCACTGTGT CCTGTCTACT TGCTGCCCGC TTGGTGCTGT (2) 15.9 0.0159 P8 GC+SHH+1d culture CCCACTGTGT CCTGTCTACT TGCTGCCCGC TTGGTGCTGT (2) 19.9 0.0199 3T3 fibroblasts CCTGTCTACT TTGGTGCTGT (2) 24.5 0.0245 E15 cortex CCTGTCTACT TGTTGGAGAG (2) 19.7 0.0197 P1 cortex CCTGTCTACT TGTTGGAGAG (2) 18.2 0.0182 Hypothalamus CCTGTCTACT 1.8 0.0018 E12.5 retina CCCACTGTGT CCTGTCTACT GGCTCAGGAA TGCTGCCCGC TTGGTGCTGT (2) 15.1 0.0151 E14.5 retina CCCACTGTGT CCTGTCTACT 7.3 0.0073 E16.5 retina CCCACTGTGT CCTGTCTACT GGCTCAGGAA TGCTGCCCGC 10.8 0.0108 E18.5 retina CCTGTCTACT GGCTCAGGAA TGCTGCCCGC 5.4 0.0054 P0.5 retina CCCACTGTGT CCTGTCTACT TGCTGCCCGC 25.5 0.0255 P2.5 retina GGCTCAGGAA TGCTGCCCGC 10.5 0.0105 P4.5 retina CCCACTGTGT CCTGTCTACT GGCTCAGGAA TGCTGCCCGC 15.9 0.0159 P6.5 retina CCCACTGTGT GGCTCAGGAA TGCTGCCCGC TTGGTGCTGT (2) 11.7 0.0117 P10.5 crx- retina CCTGTCTACT TGCTGCCCGC TTGGTGCTGT (2) 26 0.026 P10.5 crx+ retina CCTGTCTACT TGCTGCCCGC 7.7 0.0077 Adult retinal CCCACTGTGT CCTGTCTACT 16.7 0.0167 ONL CCTGTCTACT TGCTGCCCGC 5.7 0.0057