| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TGGTCAGGAC TGGTTGCTGG
| 70.1 | 0.0701 |
| Cb medulloblastoma | TGGTCAGGAC TGGTTGCTGG
| 117.9 | 0.1179 |
| P8 GC+1d culture | GCCCCTAGTT TCAGGTGGCT (2) TGGTCAGGAC TGGTTGCTGG
| 61.6 | 0.0616 |
| P8 GC+SHH+1d culture | TCAGGTGGCT (2) TGGTCAGGAC TGGTTGCTGG
| 93.7 | 0.0937 |
| 3T3 fibroblasts | TGGTTGCTGG
| 220.8 | 0.2208 |
| E15 cortex | TCAGGTGGCT (2) TGGTTGCTGG
| 282 | 0.282 |
| P1 cortex | TGGTTGCTGG
| 86.4 | 0.0864 |
| Hypothalamus | CTCTGCCCTC GGTGTGAAGG (2) TGGTCAGGAC TGGTTGCTGG
| 364.1 | 0.3641 |
| E12.5 retina | GTGTCATCTA TGGTCAGGAC TGGTTGCTGG
| 161.5 | 0.1615 |
| E14.5 retina | TGGTCAGGAC TGGTTGCTGG
| 945.6 | 0.9456 |
| E16.5 retina | CTCTGCCCTC GCCCCTAGTT GTGTCATCTA TGGTCAGGAC TGGTTGCTGG
| 787.8 | 0.7878 |
| E18.5 retina | TCAGGTGGCT (2) TGGTCAGGAC TGGTTGCTGG
| 274.6 | 0.2746 |
| P0.5 retina | GCCCCTAGTT GTGTCATCTA TCAGGTGGCT (2) TGGTCAGGAC TGGTTGCTGG
| 214 | 0.214 |
| P2.5 retina | TCAGGTGGCT (2) TGGTCAGGAC TGGTTGCTGG
| 172.5 | 0.1725 |
| P4.5 retina | GTGTCATCTA TCAGGTGGCT (2) TGGTCAGGAC TGGTTGCTGG
| 166.5 | 0.1665 |
| P6.5 retina | GGTGTGAAGG (2) TCAGGTGGCT (2) TGGTCAGGAC TGGTTGCTGG
| 170 | 0.17 |
| P10.5 crx- retina | CTCTGCCCTC GGTGTGAAGG (2) TCAGGTGGCT (2) TGGTCAGGAC TGGTTGCTGG
| 293.6 | 0.2936 |
| P10.5 crx+ retina | GGTGTGAAGG (2) TGGTCAGGAC TGGTTGCTGG
| 107.6 | 0.1076 |
| Adult retinal | GGTGTGAAGG (2) TGGTCAGGAC TGGTTGCTGG
| 229.6 | 0.2296 |
| ONL | GGTGTGAAGG (2) TGGTCAGGAC TGGTTGCTGG
| 402.2 | 0.4022 |