Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.88349	3200001F09Rik	RIKEN cDNA 3200001F09 gene	4	4 65.71 cM	71817
Gene Ontology	cytoplasm | integral to membrane
Human Homolog	SMP1[small membrane protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCTAAAGAG GTTTAAAGAG TTCTTTTTTA (3) 6.5 0.0065 P8 GC+1d culture GTCTAAAGAG 6.8 0.0068 P8 GC+SHH+1d culture GTCTAAAGAG GTTTAAAGAG TTCTTTTTTA (3) 4.7 0.0047 3T3 fibroblasts GTCTAAAGAG 3.5 0.0035 P1 cortex GTCTAAAGAG 4.5 0.0045 Hypothalamus GTCTAAAGAG 5.4 0.0054 E12.5 retina GTCTAAAGAG TACCCCAGGA 5.7 0.0057 E16.5 retina GTCTAAAGAG GTTTAAAGAG 3.6 0.0036 E18.5 retina GTCTAAAGAG TACCCCAGGA 3.6 0.0036 P2.5 retina GTCTAAAGAG TACCCCAGGA 5.3 0.0053 P4.5 retina GTCTAAAGAG TACCCCAGGA 7.9 0.0079 P6.5 retina GTCTAAAGAG GTTTAAAGAG 5 0.005 P10.5 crx- retina GTCTAAAGAG 7.4 0.0074 P10.5 crx+ retina GTCTAAAGAG TTCTTTTTTA (3) 9.6 0.0096 Adult retinal GTCTAAAGAG TTCTTTTTTA (3) 7.5 0.0075 ONL GTCTAAAGAG GTTTAAAGAG 5.7 0.0057