Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8924	AU022875	expressed sequence AU022875	16		106342
Mm.8924	A130034M23Rik	RIKEN cDNA A130034M23 gene	16		320759
Mm.8924	Gm542	gene model 542, (NCBI)	16		224087
Human Homolog	AFURS1[ATPase family homolog up-regulated in senescence cells]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATTAATAA (5) CACTGTTGAG (4) GGAAACAAAA (3) TAAATGCTTA TGCTGACAGA 16.2 0.0162 Cb medulloblastoma CACTGTTGAG (4) CAGTTTTGTT (3) GGAAACAAAA (3) GGTCCTGCTT (3) TAAATGCTTA TGCACATAAT TGCTGACAGA 23 0.023 P8 GC+1d culture AAATTAATAA (5) CACTGTTGAG (4) TGCTGACAGA 18.2 0.0182 P8 GC+SHH+1d culture CACTGTTGAG (4) GGTCCTGCTT (3) TAAATGCTTA TGCTGACAGA 16.5 0.0165 3T3 fibroblasts GGTCCTGCTT (3) TGCTGACAGA 17.5 0.0175 E15 cortex CACTGTTGAG (4) 24.7 0.0247 P1 cortex CACTGTTGAG (4) GGAAACAAAA (3) TGCTGACAGA 31.7 0.0317 Hypothalamus AAATTAATAA (5) CACTGTTGAG (4) TGCTGACAGA 7.2 0.0072 E12.5 retina AAATTAATAA (5) TAATATGTGT (2) TGCTGACAGA 13.2 0.0132 E14.5 retina CAGTTTTGTT (3) TGCACATAAT TGCTGACAGA 9.1 0.0091 E16.5 retina AAATTAATAA (5) GGAAACAAAA (3) TAATATGTGT (2) TGCTGACAGA 16.3 0.0163 E18.5 retina CACTGTTGAG (4) GGAAACAAAA (3) 7.2 0.0072 P0.5 retina AAATTAATAA (5) CACTGTTGAG (4) TAATATGTGT (2) TGCTGACAGA 19.7 0.0197 P2.5 retina CACTGTTGAG (4) TAATATGTGT (2) TGCACATAAT TGCTGACAGA 15.8 0.0158 P4.5 retina CACTGTTGAG (4) TAATATGTGT (2) TGCACATAAT TGCTGACAGA 13.9 0.0139 P6.5 retina CACTGTTGAG (4) CAGTTTTGTT (3) TAAATGCCCA (3) TAAATGCTTA TAATATGTGT (2) TGCTGACAGA 28.4 0.0284 P10.5 crx- retina CACTGTTGAG (4) TAAATGCCCA (3) TAATATGTGT (2) TGCTGACAGA 18.7 0.0187 P10.5 crx+ retina CACTGTTGAG (4) TAAATGCCCA (3) TGCTGACAGA 11.5 0.0115 Adult retinal TGCTGACAGA 9.3 0.0093 ONL AAATTAATAA (5) CAGTTTTGTT (3) GGTCCTGCTT (3) TAAATGCTTA TAATATGTGT (2) TGCTGACAGA 15.2 0.0152