Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9257	D10Wsu52e	DNA segment, Chr 10, Wayne State University 52, expressed	10	10 46.0 cM	28088
Human Homolog	HSPC117[hypothetical protein HSPC117]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATACCTTCTG (2) CTATTAAATA (4) GCTGCCTTAG (2) GGAAAAAAAA (2) 19.6 0.0196 Cb medulloblastoma GAGATGGGGG GGAAAAAAAA (2) GTGCCACCAA (2) 48.5 0.0485 P8 GC+1d culture ATACCTTCTG (2) CTATTAAATA (4) GAGATGGGGG GCTGCCCTTT GCTGGTGGAG (3) GGAAAAAAAA (2) 29.6 0.0296 P8 GC+SHH+1d culture CTATTAAATA (4) GAGATGGGGG GGAAAAAAAA (2) TTATTAAATA (2) 18.8 0.0188 3T3 fibroblasts GCTGGCCTTT 3.5 0.0035 E15 cortex ATACCTTCTG (2) CTATTAAATA (4) GGAAAAAAAA (2) 19.7 0.0197 P1 cortex ATACCTTCTG (2) CTATTAAATA (4) GCTGCCTTAG (2) GCTGCTTTGA GGAAAAAAAA (2) 27.1 0.0271 Hypothalamus CTATTAAATA (4) GAGATGGGGG GGAAAAAAAA (2) 29 0.029 E12.5 retina CTATTAAATA (4) GAGATGGGGG GCTGCTTTGA GGAAAAAAAA (2) 20.7 0.0207 E14.5 retina ATACCTTCTG (2) CTATTAAATA (4) GCTGCTTTGA GGAAAAAAAA (2) 38.2 0.0382 E16.5 retina ATACCTTCTG (2) CTATTAAATA (4) GAGATGGGGG GCTGGCCTTT GGAAAAAAAA (2) GGGGAACCTG TTATTAAATA (2) 36.1 0.0361 E18.5 retina CTATTAAATA (4) GAGATGGGGG GCTGGCCTTT GCTGGTGGAG (3) GGAAAAAAAA (2) TTGAAAGAGT 47.2 0.0472 P0.5 retina CTATTAAATA (4) GCTGCCTTAG (2) GGAAAAAAAA (2) TTATTAAATA (2) 27.5 0.0275 P2.5 retina CTATTAAATA (4) GCTGCCTTAG (2) GCTGCTTTGA GGAAAAAAAA (2) TTATTAAATA (2) 35.1 0.0351 P4.5 retina CTATTAAATA (4) GGAAAAAAAA (2) TTATTAAATA (2) 41.6 0.0416 P6.5 retina CTATTAAATA (4) GAGATGGGGG GCTGCTTTGA GGAAAAAAAA (2) GGGGAACCTG 31.7 0.0317 P10.5 crx- retina CTATTAAATA (4) GCTGCCTTAG (2) GGAAAAAAAA (2) GGGGAACCTG TTATTAAATA (2) 22.4 0.0224 P10.5 crx+ retina CTATTAAATA (4) GCTGCTTTGA GCTGGTGGAG (3) GGAAAAAAAA (2) GGGGAACCTG TTATTAAATA (2) 34.5 0.0345 Adult retinal CTATTAAATA (4) GGAAAAAAAA (2) GTGCCACCAA (2) TTGAAAGAGT 13.1 0.0131 ONL CTATTAAATA (4) GCTGCTTTGA GGAAAAAAAA (2) GTGCCACCAA (2) 26.7 0.0267