| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATGGAGGAAG TAAAAAAAAA (3) TAAAAAAAGA TAAAAAAGAA
| 63.6 | 0.0636 |
| Cb medulloblastoma | CAAAAAAAAG GGGTTGTTCA TAAAAAAAAA (3)
| 136.4 | 0.1364 |
| P8 GC+1d culture | CAAAAAAAAG TAAAAAAAAA (3) TAAAAAAGAA
| 75.3 | 0.0753 |
| P8 GC+SHH+1d culture | ATGGAGGAAG GGGTTGTTCA TAAAAAAAAA (3) TAAAAAAGAA
| 110.1 | 0.1101 |
| 3T3 fibroblasts | TAAAAAAAAA (3) TAAAAAAGAA
| 10.5 | 0.0105 |
| E15 cortex | TAAAAAAAAA (3)
| 9.9 | 0.0099 |
| P1 cortex | TAAAAAAAAA (3) TAAAAAAGAA
| 59.1 | 0.0591 |
| Hypothalamus | GGGTTGTTCA TAAAAAAAAA (3) TAAAAAAGAA
| 38 | 0.038 |
| E12.5 retina | GGGTTGTTCA TAAAAAAAAA (3) TAAAAAAGAA
| 28.2 | 0.0282 |
| E14.5 retina | TAAAAAAAAA (3) TAAAAAAGAA
| 43.7 | 0.0437 |
| E16.5 retina | GGGTTGTTCA TAAAAAAAAA (3) TAAAAAAGAA
| 27.1 | 0.0271 |
| E18.5 retina | CAAAAAAAAG GGGTTGTTCA TAAAAAAAAA (3) TAAAAAAAGA
| 112.7 | 0.1127 |
| P0.5 retina | AAAAGGGGAT (2) CAAAAAAAAG GGGTTGTTCA TAAAAAAAAA (3) TAAAAAAGAA
| 47.2 | 0.0472 |
| P2.5 retina | CAAGAATCCC TAAAAAAAAA (3)
| 74 | 0.074 |
| P4.5 retina | CAAGAATCCC TAAAAAAAAA (3) TAAAAAAAGA TAAAAAAGAA
| 134.7 | 0.1347 |
| P6.5 retina | ATGGAGGAAG CAAGAATCCC GGGTTGTTCA TAAAAAAAAA (3)
| 71.8 | 0.0718 |
| P10.5 crx- retina | GGGTTGTTCA TAAAAAAAAA (3)
| 22.3 | 0.0223 |
| P10.5 crx+ retina | AAAAGGGGAT (2) CAAAAAAAAG GGGTTGTTCA TAAAAAAAAA (3)
| 32.6 | 0.0326 |
| Adult retinal | CAAAAAAAAG TAAAAAAAAA (3)
| 20.4 | 0.0204 |
| ONL | AAAAGGGGAT (2) GGGTTGTTCA TAAAAAAAAA (3)
| 32.5 | 0.0325 |