| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAAAGAAGG (4) CTCCCACCTT (3) GTGCAGAGGA
| 6.5 | 0.0065 |
| Cb medulloblastoma | CAAAAGAAGG (4) CTCCCACCTT (3) GTGCAGAGGA
| 18.5 | 0.0185 |
| P8 GC+1d culture | CTCCCACCTT (3) GTGCAGAGGA
| 10.2 | 0.0102 |
| P8 GC+SHH+1d culture | AATTTACAGT CAAAAGAAGG (4) CTCCCACCTT (3) GTGCAGAGGA
| 16.4 | 0.0164 |
| 3T3 fibroblasts | CTCCCACCTT (3)
| 10.5 | 0.0105 |
| E15 cortex | CTCCCACCTT (3) GCGCAGGAGG (2) GTGCAGAGGA
| 19.7 | 0.0197 |
| P1 cortex | TAATGAAAAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | CAAAAGAAGG (4) CCCTTTTTTT (4) CTCCCACCTT (3) GTGCAGAGGA
| 14.5 | 0.0145 |
| E12.5 retina | CTCCCACCTT (3) GTGCAGAGGA
| 13.2 | 0.0132 |
| E14.5 retina | CAAAAGAAGG (4) CTCCCACCTT (3) GCGCAGGAGG (2)
| 16.4 | 0.0164 |
| E16.5 retina | CTCCCACCTT (3) GCGCAGGAGG (2) GTGCAGAGGA TAATGAAAAA (2)
| 14.5 | 0.0145 |
| E18.5 retina | CAAAAGAAGG (4) CTCCCACCTT (3) GCGCAGGAGG (2) GTGCAGAGGA
| 20 | 0.02 |
| P0.5 retina | CTCCCACCTT (3)
| 11.8 | 0.0118 |
| P2.5 retina | CTCCCACCTT (3) GTGCAGAGGA
| 17.6 | 0.0176 |
| P4.5 retina | CAAAAGAAGG (4) CTCCCACCTT (3) GTGCAGAGGA TAATGAAAAA (2)
| 49.5 | 0.0495 |
| P6.5 retina | CAAAAGAAGG (4) CCCTTTTTTT (4) CTCCCACCTT (3) GTGCAGAGGA
| 26.7 | 0.0267 |
| P10.5 crx- retina | CAAAAGAAGG (4) CTCCCACCTT (3) GCGCAGGAGG (2) GTGCAGAGGA TAATGAAAAA (2)
| 26.1 | 0.0261 |
| P10.5 crx+ retina | AATTTACAGT CTCCCACCTT (3)
| 23 | 0.023 |
| Adult retinal | CAAAAGAAGG (4) CTCCCACCTT (3) GTGCAGAGGA TAATGAAAAA (2)
| 42.7 | 0.0427 |
| ONL | CAAAAGAAGG (4) CTCCCACCTT (3) TAATGAAAAA (2)
| 19.1 | 0.0191 |