Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.998	Psen1	presenilin 1	12	12 37.0 cM	19164
Gene Ontology	apoptosis | blood vessel development | endoplasmic reticulum | Golgi apparatus | heart development | integral to membrane | intracellular signaling cascade | membrane | neuronal migration | nucleus | positive regulation of protein kinase activity | protein binding
Human Homolog	PSEN1[presenilin 1 (Alzheimer disease 3)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGAAATGG ATGTTTCTTC (3) GACAAGAACT (2) TTGGAAATAA (2) 53.9 0.0539 Cb medulloblastoma AAGGAAATGG ATGTTTCTTC (3) TGATGCAAAT 18.5 0.0185 P8 GC+1d culture AAGGAAATGG ATGTTTCTTC (3) CTGGGAGTTG GACAAGAACT (2) TGATGCAAAT TTGGAAATAA (2) 41.1 0.0411 P8 GC+SHH+1d culture AAGGAAATGG ATGTTTCTTC (3) CTGGGAGTTG GACAAGAACT (2) TGATGCAAAT TTGGAAATAA (2) 39.8 0.0398 3T3 fibroblasts AAGGAAATGG 14 0.014 E15 cortex AAGGAAATGG 44.5 0.0445 P1 cortex AAGGAAATGG CTGGGAGTTG TGATGCAAAT TTGGAAATAA (2) 49.9 0.0499 Hypothalamus AAGGAAATGG ATGTTTCTTC (3) CTGGGAGTTG GACAAGAACT (2) TTGGAAATAA (2) 38 0.038 E12.5 retina AAGGAAATGG ATGTTTCTTC (3) CTGGGAGTTG TGATGCAAAT TTGGAAATAA (2) 43.3 0.0433 E14.5 retina AAGGAAATGG GACAAGAACT (2) TGATGCAAAT TTGGAAATAA (2) 38.2 0.0382 E16.5 retina AAGGAAATGG TGATGCAAAT TTGGAAATAA (2) 50.7 0.0507 E18.5 retina AAGGAAATGG GACAAGAACT (2) TTGGAAATAA (2) 21.9 0.0219 P0.5 retina AAGGAAATGG CTGGGAGTTG GACAAGAACT (2) TGATGCAAAT 45.3 0.0453 P2.5 retina AAGGAAATGG GACAAGAACT (2) TGATGCAAAT TTGGAAATAA (2) 19.4 0.0194 P4.5 retina CTGGGAGTTG TGATGCAAAT TTGGAAATAA (2) 15.8 0.0158 P6.5 retina AAGGAAATGG CTGGGAGTTG GACAAGAACT (2) TTGGAAATAA (2) 20 0.02 P10.5 crx- retina AAGGAAATGG GACAAGAACT (2) TTGGAAATAA (2) 24.2 0.0242 P10.5 crx+ retina AAGGAAATGG CTGGGAGTTG GACAAGAACT (2) GATCCAGGGG TGATGCAAAT TTGGAAATAA (2) 21.1 0.0211 Adult retinal AAGGAAATGG CTGGGAGTTG GACAAGAACT (2) GATCCAGGGG 20.5 0.0205 ONL AAGGAAATGG AGAGAAAGAA (2) CTGGGAGTTG GACAAGAACT (2) 19.1 0.0191