| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAACAATGT (4) GGAATTTTTA (4) TGAAAAGAAG (5)
| 4.8 | 0.0048 |
| Cb medulloblastoma | TAATTATTTG (5) TGTGTATGAA (4)
| 9.2 | 0.0092 |
| P8 GC+1d culture | ATTCTCTTTT (5) GGAATTTTTA (4) TGAAAAGAAG (5) TGTGTATGAA (4)
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | GGAATTTTTA (4) GTTCCCTGAG (6) TGAAAAGAAG (5)
| 5.8 | 0.0058 |
| 3T3 fibroblasts | ATTCTCTTTT (5)
| 3.5 | 0.0035 |
| P1 cortex | AAAACAATGT (4) GGAATTTTTA (4)
| 9 | 0.009 |
| Hypothalamus | ATTCTCTTTT (5) TAATTATTTG (5)
| 3.6 | 0.0036 |
| E12.5 retina | AAAACAATGT (4) GTTCCCTGAG (6) TAATTATTTG (5) TGAAAAGAAG (5)
| 11.4 | 0.0114 |
| E14.5 retina | ATTCTCTTTT (5) TAATTATTTG (5)
| 3.6 | 0.0036 |
| E16.5 retina | GGAATTTTTA (4) TGAAAAGAAG (5)
| 7.2 | 0.0072 |
| E18.5 retina | ATTCTCTTTT (5) GGAATTTTTA (4) TAATTATTTG (5) TGAAAAGAAG (5)
| 9 | 0.009 |
| P0.5 retina | GGAATTTTTA (4) TGAAAAGAAG (5)
| 7.9 | 0.0079 |
| P2.5 retina | TGAAAAGAAG (5)
| 1.8 | 0.0018 |
| P4.5 retina | TAATTATTTG (5) TGAAAAGAAG (5)
| 6 | 0.006 |
| P10.5 crx- retina | TAATTATTTG (5)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | GGAATTTTTA (4) TAATTATTTG (5) TGTGTATGAA (4)
| 9.6 | 0.0096 |
| Adult retinal | TGAAAAGAAG (5)
| 1.9 | 0.0019 |
| ONL | TGTGTATGAA (4)
| 1.9 | 0.0019 |