Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1451	Mfge8	milk fat globule-EGF factor 8 protein	7	7 41.2 cM	17304
Gene Ontology	cell adhesion | external side of plasma membrane | extracellular space | extracellular space | extrinsic to plasma membrane | fertilization (sensu Animalia) | integrin binding | phagocytosis, binding | phagocytosis, engulfment | phosphatidylethanolamine binding | phosphatidylserine binding | positive regulation of phagocytosis | protein binding
Human Homolog	AGC1[aggrecan 1 (chondroitin sulfate proteoglycan 1, large aggregating proteoglycan, antigen identified by monoclonal antibody A0122)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 GC+1d culture GAGGAATGTG (3) TTCCATTCCG 6.8 0.0068 P8 GC+SHH+1d culture TTCCATTCCG 2.3 0.0023 3T3 fibroblasts TTCCATTCCG 17.5 0.0175 E15 cortex TTCCATTCCG 4.9 0.0049 P1 cortex TTCCATTCCG 4.5 0.0045 Hypothalamus ACAGCCAGCA TGGGGGCTGG TTCCATTCCG 10.8 0.0108 E12.5 retina GAGGAATGTG (3) TGGGGGCTGG TTCCATTCCG 7.6 0.0076 E14.5 retina GCTGCCAGAC 1.8 0.0018 E16.5 retina GAGGAATGTG (3) GCTGCCAGAC TTCCATTCCG 9 0.009 E18.5 retina TTCCATTCCG 1.8 0.0018 P0.5 retina GTCACAGTCA TTCCATTCCG 11.8 0.0118 P2.5 retina CCAAGCTTAT GAGGAATGTG (3) 5.3 0.0053 P4.5 retina TGGGGGCTGG 2 0.002 P6.5 retina ACAGCCAGCA CCAAGCTTAT GTCACAGTCA TTCCATTCCG 21.7 0.0217 P10.5 crx- retina GAGGAATGTG (3) TTCCATTCCG 9.3 0.0093 P10.5 crx+ retina CCAAGCTTAT GCTGCCAGAC TTCCATTCCG 9.6 0.0096 Adult retinal ACAGCCAGCA CCAAGCTTAT TTCCATTCCG 27.8 0.0278 ONL CCAAGCTTAT GAGGAATGTG (3) GTCACAGTCA TTCCATTCCG 32.5 0.0325