| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TGGATCTCTG
| 4.9 | 0.0049 |
| Cb medulloblastoma | CCCCAGGACA (2) TGGATCTCTG
| 30 | 0.03 |
| P8 GC+1d culture | CCCCAGGACA (2)
| 2.3 | 0.0023 |
| P8 GC+SHH+1d culture | CCCCAGGACA (2)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | CCCCAGGACA (2) GGCTTCCACC
| 7 | 0.007 |
| E15 cortex | TGGATCTCTG
| 4.9 | 0.0049 |
| P1 cortex | GGCTTCCACC TGGATCTCTG
| 9 | 0.009 |
| Hypothalamus | CCCCAGGACA (2) TGGATCTCTG
| 7.2 | 0.0072 |
| E12.5 retina | TGGATCTCTG
| 1.9 | 0.0019 |
| E14.5 retina | CCCCAGGACA (2) TGGATCTCTG TGGATTTCTG (3)
| 5.4 | 0.0054 |
| E16.5 retina | CCCCAGGACA (2) GGCTTCCACC TGGATCTCTG
| 9 | 0.009 |
| E18.5 retina | CCCCAGGACA (2) TGGATCTCTG TGGATTTCTG (3)
| 9 | 0.009 |
| P0.5 retina | CCCCAGGACA (2)
| 2 | 0.002 |
| P2.5 retina | CCCCAGGACA (2) TGGATTTCTG (3)
| 8.8 | 0.0088 |
| P4.5 retina | CCCCAGGACA (2) TGGATCTCTG TGGATTTCTG (3)
| 6 | 0.006 |
| P6.5 retina | CCCCAGGACA (2) TGGATCTCTG TGGATTTCTG (3)
| 8.3 | 0.0083 |
| P10.5 crx- retina | CCCCAGGACA (2)
| 3.7 | 0.0037 |
| P10.5 crx+ retina | CCCCAGGACA (2) TGGATCTCTG TGGATTTCTG (3)
| 5.7 | 0.0057 |
| Adult retinal | CCCCAGGACA (2) TGGATCTCTG
| 7.5 | 0.0075 |
| ONL | CCCCAGGACA (2) TGGATTTCTG (3)
| 5.7 | 0.0057 |