Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.173286	Tnpo1	transportin 1	13	13 53.0 cM	238799
Gene Ontology	cytoplasm | nuclear pore | nucleus | protein transport | protein transporter activity | protein-nucleus import, docking | transport
Human Homolog	TNPO1[transportin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAGAATAT CTGATGAAGA (2) GCTAGCTACA TATAGTGCCC TTTAAGCATC 14.6 0.0146 Cb medulloblastoma ATCCAAAACA CAGAGAATAT TTTAAGCATC 6.9 0.0069 P8 GC+1d culture CAGAGAATAT CCGACGCGCC CTGATGAAGA (2) GCTAGCTACA TTTAAGCATC 17.1 0.0171 P8 GC+SHH+1d culture CAGAGAATAT GGGCACATAC TTAACATTGG 8.3 0.0083 3T3 fibroblasts ATGATGAAGG (2) CCGACGCGCC 7 0.007 P1 cortex CAGAGAATAT TCTCTATTAA 22.7 0.0227 E12.5 retina CAGAGAATAT CTGATGAAGA (2) TTTAAGCATC 11.3 0.0113 E14.5 retina ATGATGAAGG (2) CAGAGAATAT CTGATGAAGA (2) GGGCACATAC TATAGTGCCC TTTAAGCATC 16.3 0.0163 E16.5 retina AGGAGGATGG CAGAGAATAT GGGCACATAC TCTCTATTAA TTAACATTGG TTTAAGCATC 12.6 0.0126 E18.5 retina CAGAGAATAT 7.3 0.0073 P0.5 retina CAGAGAATAT CTGATGAAGA (2) GGGCACATAC TCTCTATTAA TTTAAGCATC 13.8 0.0138 P2.5 retina CAGAGAATAT CCGACGCGCC CTGATGAAGA (2) GCTAGCTACA GGGCACATAC 17.7 0.0177 P4.5 retina ATCCAAAACA CAGAGAATAT CCGACGCGCC CTGATGAAGA (2) GCTAGCTACA TCTCTATTAA TTTAAGCATC 29.9 0.0299 P6.5 retina CAGAGAATAT CCGACGCGCC CTGATGAAGA (2) TTTAAGCATC 11.8 0.0118 P10.5 crx- retina CAGAGAATAT CTGATGAAGA (2) GGGCACATAC TCTCTATTAA TTAACATTGG TTTAAGCATC 20.5 0.0205 P10.5 crx+ retina CAGAGAATAT CCGACGCGCC GCTAGCTACA GGGCACATAC TATAGTGCCC TTTAAGCATC 13.3 0.0133 Adult retinal CAGAGAATAT GCTAGCTACA TCTCTATTAA TTTAAGCATC 16.7 0.0167 ONL AGGAGGATGG ATCCAAAACA ATGATGAAGG (2) CAGAGAATAT CCGACGCGCC CTGATGAAGA (2) GCTAGCTACA TATAGTGCCC TCTCTATTAA 36.2 0.0362