| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGAAAAAGT CAGATGTAGA
| 27.8 | 0.0278 |
| Cb medulloblastoma | AAGAAAAAGT GGACTTGGCG TAAGAAAAAA (5)
| 25.4 | 0.0254 |
| P8 GC+1d culture | AAGAAAAAGT ATATGTCAGG GGACTTGGCG
| 17.2 | 0.0172 |
| P8 GC+SHH+1d culture | AAGAAAAAGT AGGCTGCTTG (2) ATATGTCAGG GGACTTGGCG TATGTCTGTG (2)
| 25.7 | 0.0257 |
| 3T3 fibroblasts | AGGCTGCTTG (2) ATATGTCAGG GGACTTGGCG TATGTCTGTG (2)
| 31.5 | 0.0315 |
| E15 cortex | AAGAAAAAGT AGGCTGCTTG (2) GGACTTGGCG
| 19.7 | 0.0197 |
| P1 cortex | AAGAAAAAGT TATGTCTGTG (2)
| 13.6 | 0.0136 |
| Hypothalamus | AAGAAAAAGT ATATGTCAGG GGACTTGGCG TATGTCTGTG (2)
| 23.5 | 0.0235 |
| E12.5 retina | AAGAAAAAGT ATATGTCAGG
| 20.6 | 0.0206 |
| E14.5 retina | AAGAAAAAGT ATATGTCAGG GGACTTGGCG TAAGAAAAAA (5) TATGTCTGTG (2)
| 21.8 | 0.0218 |
| E16.5 retina | AAGAAAAAGT ATATGTCAGG TAAGAAAAAA (5) TATGTCTGTG (2)
| 19.9 | 0.0199 |
| E18.5 retina | AAGAAAAAGT
| 30.9 | 0.0309 |
| P0.5 retina | AAGAAAAAGT ATATGTCAGG CAGATGTAGA GGACTTGGCG
| 23.6 | 0.0236 |
| P2.5 retina | AAGAAAAAGT ATATGTCAGG
| 17.6 | 0.0176 |
| P4.5 retina | AAGAAAAAGT ATATGTCAGG TAAGAAAAAA (5)
| 45.6 | 0.0456 |
| P6.5 retina | AAGAAAAAGT AGGCTGCTTG (2) TATGTCTGTG (2)
| 23.3 | 0.0233 |
| P10.5 crx- retina | AAGAAAAAGT AGGCTGCTTG (2) ATATGTCAGG CAGATGTAGA GGACTTGGCG
| 15 | 0.015 |
| P10.5 crx+ retina | AAGAAAAAGT AGGCTGCTTG (2) ATATGTCAGG GGACTTGGCG
| 19.2 | 0.0192 |
| Adult retinal | GGACTTGGCG
| 3.7 | 0.0037 |
| ONL | AAGAAAAAGT ATATGTCAGG TATGTCTGTG (2)
| 21 | 0.021 |