| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAGGACTCCG (2) GATCTGCAGG GCGTTCCAGA (2) GCTCTCCTGG (2) GTTGAAATCT TCAAGTCCAC TCCTGACCCT (3)
| 79.7 | 0.0797 |
| Cb medulloblastoma | CAGGACTCCG (2) GGTTGGAAAC GTTGAAATCT
| 129.5 | 0.1295 |
| P8 GC+1d culture | AGAAAATGCT (2) AGTCAGTACT CAGGACTCCG (2) GCTCTCCTGG (2) GTTGAAATCT TCAAGTCCAC TGTGCCACCA
| 95.8 | 0.0958 |
| P8 GC+SHH+1d culture | AGTCAGTACT CAGGACTCCG (2) GATCTGCAGG GCTCTCCTGG (2) GCTGTGGGCT (4) GGTTGGAAAC GTTGAAATCT TCAAGTCCAC TGTGCCACCA
| 101.9 | 0.1019 |
| 3T3 fibroblasts | CAGGACTCCG (2) GCTCTCCTGG (2) GCTGTGGGCT (4) TGTGCCACCA
| 175.2 | 0.1752 |
| E15 cortex | CAGGACTCCG (2) GGCCTGCTGC
| 64.3 | 0.0643 |
| P1 cortex | CAGGACTCCC CAGGACTCCG (2) GCGTTCCAGA (2) TCCTGACCCT (3)
| 59 | 0.059 |
| Hypothalamus | AGAAAATGCT (2) CAGGACTCCG (2) GCGTTCCAGA (2) GCTCTCCTGG (2) GGTTGGAAAC TCAAGTCCAC TCCTGACCCT (3) TCTGACCTGA (2) TGTGCCACCA TTTTCATAGC (2)
| 75.9 | 0.0759 |
| E12.5 retina | AGTCAGTACT CAGGACTCCG (2) GATCTGCAGG GCGTTCCAGA (2) GCTCTCCTGG (2) GGTTGGAAAC GTTGAAATCT TCCTGACCCT (3) TCTGACCTGA (2) TGTGCCACCA
| 84.6 | 0.0846 |
| E14.5 retina | CAGGACTCCC CAGGACTCCG (2) GCGTTCCAGA (2) GGTGAAAACT TCTGACCTGA (2) TTTTCATAGC (2)
| 63.7 | 0.0637 |
| E16.5 retina | AGAAAATGCT (2) CAGGACTCCG (2) GCGTTCCAGA (2) GGTGAAAACT TTTTCATAGC (2)
| 52.5 | 0.0525 |
| E18.5 retina | CAGGACTCCG (2) GATCTGCAGG TTTTCATAGC (2)
| 52.7 | 0.0527 |
| P0.5 retina | AGAAAATGCT (2) CAGGACTCCG (2) GCGTTCCAGA (2) GGTTGGAAAC GTTGAAATCT TCCTGACCCT (3) TGTGCCACCA
| 31.6 | 0.0316 |
| P2.5 retina | CAGGACTCCG (2) GCGTTCCAGA (2) GCTGTGGGCT (4) GGTGAAAACT GGTTGGAAAC GTTGAAATCT TCCTGACCCT (3) TCTGACCTGA (2) TGTGCCACCA
| 68.8 | 0.0688 |
| P4.5 retina | CAGGACTCCC CAGGACTCCG (2) GCGTTCCAGA (2) GGTTGGAAAC GTTGAAATCT TGTGCCACCA
| 57.6 | 0.0576 |
| P6.5 retina | CAGAGCAGGG CAGGACTCCG (2) GCGTTCCAGA (2) TCAAGTCCAC TCCTGACCCT (3)
| 43.4 | 0.0434 |
| P10.5 crx- retina | AGAAAATGCT (2) CAGGACTCCG (2) GGTTGGAAAC
| 33.4 | 0.0334 |
| P10.5 crx+ retina | CAGGACTCCG (2) GGCCTGCTGC GTTGAAATCT TGTGCCACCA
| 59.5 | 0.0595 |
| Adult retinal | AGTCAGTACT CAGAGCAGGG CAGGACTCCG (2) GATCTGCAGG GCGTTCCAGA (2) GGTTGGAAAC TGTGCCACCA
| 29.9 | 0.0299 |
| ONL | AGAAAATGCT (2) CAGGACTCCG (2) GGCCTGCTGC GTTGAAATCT TCTGACCTGA (2) TGTGCCACCA
| 15.2 | 0.0152 |