Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.223717	Smad1	MAD homolog 1 (Drosophila)	8	8 C1	17125
Gene Ontology	BMP signaling pathway | BMP signaling pathway | common-partner SMAD protein phosphorylation | gametogenesis | homeostasis | intracellular | MAPKKK cascade | organogenesis | protein binding | regulation of transcription from Pol II promoter | regulation of transcription, DNA-dependent | RNA polymerase II transcription factor activity | SMAD protein heteromerization | transcription factor activity | transcription factor complex
Human Homolog	SMAD1[SMAD, mothers against DPP homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 26 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACTTGAAGG TCATTTATTG (2) TTGTCACCAT 9.9 0.0099 P8 GC+1d culture TTGTCACCAT 2.3 0.0023 P8 GC+SHH+1d culture ATGGCGCCTC TACTTGAAGG TCATTTATTG (2) 7.1 0.0071 3T3 fibroblasts ATGGCGCCTC TACTTGAAGG TCATTTATTG (2) 14 0.014 P1 cortex CATAGTAATC 4.5 0.0045 Hypothalamus TTGTCACCAT 3.6 0.0036 E12.5 retina ATGGCGCCTC CATAGTAATC 3.8 0.0038 E14.5 retina TCATTTATTG (2) TTGTCACCAT 5.4 0.0054 E16.5 retina TTGTCACCAT 3.6 0.0036 E18.5 retina TGTCCCACCG 3.6 0.0036 P0.5 retina ATGGCGCCTC CATAGTAATC TCATTTATTG (2) 7.9 0.0079 P2.5 retina TCATTTATTG (2) 1.8 0.0018 P4.5 retina CATAGTAATC TCATTTATTG (2) 6 0.006 P10.5 crx+ retina ATGGCGCCTC 1.9 0.0019 ONL TGTCCCACCG 1.9 0.0019