| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTAATTATTT (2)
| 4.9 | 0.0049 |
| Cb medulloblastoma | AAGTAAGGTG GTGGATTAGA
| 4.6 | 0.0046 |
| P8 GC+1d culture | CTAATTATTT (2) GGAACACATC GTGGATTAGA
| 3.3 | 0.0033 |
| P8 GC+SHH+1d culture | AAGTAAGGTG ACCGTTTCCA CTAATTATTC CTAATTATTT (2) GAAAATTCCA GTGGATTAGA
| 9.4 | 0.0094 |
| 3T3 fibroblasts | AGGTAAGGTG
| 3.5 | 0.0035 |
| E15 cortex | CTAATTATTT (2)
| 4.9 | 0.0049 |
| Hypothalamus | AAGTAAGGTG ACCGTTTCCA
| 9 | 0.009 |
| E12.5 retina | AAGTAAGGTG CTAATTATTT (2)
| 5.7 | 0.0057 |
| E14.5 retina | AAGTAAGGTG AGGTAAGGTG CTAATTATTT (2)
| 7.2 | 0.0072 |
| E16.5 retina | AAGTAAGGTG CTAATTATTT (2) GTGGATTAGA
| 9 | 0.009 |
| E18.5 retina | AAGTAAGGTG CTAATTATTT (2) GTGGATTAGA
| 5.4 | 0.0054 |
| P0.5 retina | AAGTAAGGTG AGGTAAGGTG CTAATTATTC CTAATTATTT (2) GAAAATTCCA
| 11.9 | 0.0119 |
| P2.5 retina | AAGTAAGGTG ACCGTTTCCA CTAATTATTT (2) GAAAATTCCA GTGGATTAGA
| 24.7 | 0.0247 |
| P4.5 retina | AAGTAAGGTG ACCGTTTCCA
| 4 | 0.004 |
| P6.5 retina | GTGGATTAGA
| 1.7 | 0.0017 |
| P10.5 crx- retina | AAGTAAGGTG ACCGTTTCCA GGAACACATC GTGGATTAGA
| 11.2 | 0.0112 |
| P10.5 crx+ retina | CTAATTATTC CTAATTATTT (2) GTGGATTAGA
| 5.7 | 0.0057 |
| Adult retinal | AAGTAAGGTG GAAAATTCCA
| 3.8 | 0.0038 |
| ONL | AAGTAAGGTG GAAAATTCCA GGAACACATC
| 9.5 | 0.0095 |