| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACAGGGTTGG (2) CTGAGGCCCA CTTCTGCAGT (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | CTTCTGCAGT (2) GCTCAGCTTA TATTTTGGTT
| 18.4 | 0.0184 |
| P8 GC+1d culture | ACAGGGTTGG (2) CTGAGGCCCA GCTCAGCTTA
| 18.2 | 0.0182 |
| P8 GC+SHH+1d culture | ACAGGGTTGG (2) GCTCAGCTTA
| 8.2 | 0.0082 |
| 3T3 fibroblasts | ACAGGGTTGG (2) CTTCTGCAGT (2)
| 21 | 0.021 |
| E15 cortex | AATGTGCTCG CTTCTGCAGT (2) GCTCAGCTTA
| 24.7 | 0.0247 |
| P1 cortex | GCTCAGCTTA
| 27.3 | 0.0273 |
| Hypothalamus | AATGTGCTCG ACAGGGTTGG (2) GCTCAGCTTA
| 7.2 | 0.0072 |
| E12.5 retina | GCTCAGCTTA
| 13.1 | 0.0131 |
| E14.5 retina | AATGTGCTCG GCTCAGCTTA TATTTTGGTT
| 5.4 | 0.0054 |
| E16.5 retina | TATTTTGGTT
| 1.8 | 0.0018 |
| E18.5 retina | AATGTGCTCG GCTCAGCTTA
| 3.6 | 0.0036 |
| P0.5 retina | CTGAGGCCCA CTTCTGCAGT (2) GCTCAGCTTA
| 27.6 | 0.0276 |
| P2.5 retina | GCTCAGCTTA TATTTTGGTT
| 8.8 | 0.0088 |
| P4.5 retina | GCTCAGCTTA
| 5.9 | 0.0059 |
| P6.5 retina | GCTCAGCTTA TATTTTGGTT
| 10 | 0.01 |
| P10.5 crx- retina | ACAGGGTTGG (2) TATTTTGGTT
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AATGTGCTCG ACAGGGTTGG (2) GCTCAGCTTA
| 19.2 | 0.0192 |
| Adult retinal | GCTCAGCTTA
| 5.6 | 0.0056 |
| ONL | TATTTTGGTT
| 1.9 | 0.0019 |