Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.250359
Pmpca
peptidase (mitochondrial processing) alpha
2
66865
Human Homolog
PMPCA[peptidase (mitochondrial processing) alpha]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGACTTCTT
(
2
)
TTACTGTTGG
14.7
0.0147
Cb medulloblastoma
CAGACTTCTT
(
2
)
9.2
0.0092
P8 GC+1d culture
AGAAATTGTT
(
2
)
CAGACTTCTT
(
2
)
CATCTTGGGG
(
2
)
TTACTGTTGG
9.1
0.0091
P8 GC+SHH+1d culture
CAGACTTCTT
(
2
)
CATCTTGGGG
(
2
)
3.5
0.0035
P1 cortex
CAGACTTCTT
(
2
)
4.5
0.0045
Hypothalamus
TTACTGTTGG
3.6
0.0036
E12.5 retina
CAGACTTCTT
(
2
)
CATCTTGGGG
(
2
)
TTACTGTTGG
7.6
0.0076
E14.5 retina
CAGACTTCTT
(
2
)
TTACTGTTGG
5.4
0.0054
E16.5 retina
AGAAATTGTT
(
2
)
CAGACTTCTT
(
2
)
CATCTTGGGG
(
2
)
TTACTGTTGG
12.6
0.0126
E18.5 retina
CAGACTTCTT
(
2
)
7.3
0.0073
P0.5 retina
CAGACTTCTT
(
2
)
TTACTGTTGG
5.9
0.0059
P2.5 retina
CAGACTTCTT
(
2
)
7
0.007
P4.5 retina
AGAAATTGTT
(
2
)
CAGACTTCTT
(
2
)
TTACTGTTGG
12
0.012
P6.5 retina
AGAAATTGTT
(
2
)
CAGACTTCTT
(
2
)
CATCTTGGGG
(
2
)
TTACTGTTGG
15
0.015
P10.5 crx- retina
AGAAATTGTT
(
2
)
CAGACTTCTT
(
2
)
TTACTGTTGG
26
0.026
P10.5 crx+ retina
CAGACTTCTT
(
2
)
TTACTGTTGG
9.6
0.0096
Adult retinal
CAGACTTCTT
(
2
)
TTACTGTTGG
7.5
0.0075
ONL
CAGACTTCTT
(
2
)
TTACTGTTGG
7.6
0.0076
