| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGACACTGTA (2)
| 1.6 | 0.0016 |
| Cb medulloblastoma | CTAAGTTAAA (2) GGACACTGTA (2) GTAGGATCTT (2) TTGATTTGGG (2)
| 16.1 | 0.0161 |
| P8 GC+1d culture | CTAAGTTAAA (2) GGACACTGTA (2) TTGATTTGGG (2)
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | CTAAGTTAAA (2) GCCCTGAAAA (4) GGACACTGTA (2) GTAGGATCTT (2) TTGATTTGGG (2)
| 8.2 | 0.0082 |
| 3T3 fibroblasts | GCCCTGAAAA (4)
| 3.5 | 0.0035 |
| P1 cortex | AATATACATA (4) GCCCTGAAAA (4) GGACACTGTA (2) TTGATTTGGG (2)
| 31.7 | 0.0317 |
| Hypothalamus | CAAACTTCCG (2) GCCCTGAAAA (4) GGACACTGTA (2)
| 10.8 | 0.0108 |
| E12.5 retina | GCCCTGAAAA (4) GTAGGATCTT (2)
| 3.8 | 0.0038 |
| E14.5 retina | AATATACATA (4) GGACACTGTA (2) GTAGGATCTT (2)
| 5.4 | 0.0054 |
| E16.5 retina | CTAAGTTAAA (2) GTAGGATCTT (2)
| 3.6 | 0.0036 |
| P0.5 retina | GCCCTGAAAA (4) GTAGGATCTT (2) TTGATTTGGG (2)
| 7.9 | 0.0079 |
| P2.5 retina | GTAAACTGCA (2) TACTGTTTTC (2)
| 7.1 | 0.0071 |
| P4.5 retina | CTAAGTTAAA (2) GCCCTGAAAA (4) GGACACTGTA (2) TACTGTTTTC (2)
| 11.9 | 0.0119 |
| P6.5 retina | AATATACATA (4) GCCCTGAAAA (4) GGACACTGTA (2) TACTGTTTTC (2) TTGATTTGGG (2)
| 11.8 | 0.0118 |
| P10.5 crx- retina | CTAAGTTAAA (2) GCCCTGAAAA (4) GGACACTGTA (2) TTGATTTGGG (2)
| 26 | 0.026 |
| P10.5 crx+ retina | CTAAGTTAAA (2) GCCCTGAAAA (4) GGACACTGTA (2) GTAAACTGCA (2) TTGATTTGGG (2)
| 28.7 | 0.0287 |
| Adult retinal | CAAACTTCCG (2) CTAAGTTAAA (2) GCCCTGAAAA (4) GGACACTGTA (2) TTGATTTGGG (2)
| 26.1 | 0.0261 |
| ONL | CAAACTTCCG (2) CTAAGTTAAA (2) GCCCTGAAAA (4) GGACACTGTA (2) TACTGTTTTC (2)
| 24.8 | 0.0248 |