Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260282
5430405G24Rik
RIKEN cDNA 5430405G24 gene
11
237943
Human Homolog
KIAA0553[KIAA0553 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGAGGAAGG
(
4
)
CTCTGGCCGC
TGCTTCCCAG
9.7
0.0097
Cb medulloblastoma
CAGAGGAAGG
(
4
)
CTCTGGCCGC
4.6
0.0046
P8 GC+1d culture
CTCTGGCCGC
GAGGAGGGGA
(
2
)
TGCTTCCCAG
4.5
0.0045
P8 GC+SHH+1d culture
TGCTTCCCAG
1.2
0.0012
3T3 fibroblasts
CAGAGGAAGG
(
4
)
CTCTGGCCGC
14
0.014
E15 cortex
TATATTTTAT
(
3
)
4.9
0.0049
P1 cortex
CTCTGGCCGC
4.5
0.0045
Hypothalamus
CAGAGGAAGG
(
4
)
TGCTTCCCAG
3.6
0.0036
E12.5 retina
CTCTGGCCGC
GAGGAGGGGA
(
2
)
3.8
0.0038
E14.5 retina
CAGAGGAAGG
(
4
)
1.8
0.0018
E16.5 retina
CAGAGGAAGG
(
4
)
1.8
0.0018
P0.5 retina
CAGAGGAAGG
(
4
)
2
0.002
P2.5 retina
CAGAGGAAGG
(
4
)
GAGGAGGGGA
(
2
)
TATATTTTAT
(
3
)
7.1
0.0071
P4.5 retina
CTCTGGCCGC
TATATTTTAT
(
3
)
6
0.006
P6.5 retina
CAGAGGAAGG
(
4
)
TGCTTCCCAG
5
0.005
P10.5 crx- retina
CTCTGGCCGC
1.9
0.0019
P10.5 crx+ retina
CTCTGGCCGC
1.9
0.0019
Adult retinal
CTCTGGCCGC
TGCTTCCCAG
5.6
0.0056
ONL
TATATTTTAT
(
3
)
TGCTTCCCAG
3.8
0.0038
