Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271798	Htf9c	HpaII tiny fragments locus 9c	16	16 10.9 cM	15547
Gene Ontology	ATP binding | protein amino acid phosphorylation | protein kinase activity | RNA binding | S-adenosylmethionine-dependent methyltransferase activity
Human Homolog	HTF9C[HpaII tiny fragments locus 9C]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATACTTCCAC (2) CAAAGAAGCA (2) CTGCAAGGGT (2) GCTAGGAAAG (2) GGCAACTTTG (6) TGTGTGACAG (2) 12.9 0.0129 Cb medulloblastoma TGTGTGACAG (2) 2.3 0.0023 P8 GC+1d culture ATACTTCCAC (2) CTGCAAGGGT (2) GGCAACTTTG (6) 6.8 0.0068 P8 GC+SHH+1d culture ATACTTCCAC (2) GCTAGGAAAG (2) 5.9 0.0059 3T3 fibroblasts ATACTTCCAC (2) CAAAGAAGCA (2) CTGCAAGGGT (2) 14 0.014 E15 cortex ATACTTCCAC (2) 4.9 0.0049 P1 cortex CTGCAAGGGT (2) 4.5 0.0045 Hypothalamus CTGCAAGGGT (2) 5.4 0.0054 E12.5 retina CTGCAAGGGT (2) 1.9 0.0019 E14.5 retina ATACTTCCAC (2) CTGCAAGGGT (2) 7.3 0.0073 E16.5 retina AACAAGGGCC CAAAGAAGCA (2) GCTAGGAAAG (2) TGTGTGACAG (2) 7.2 0.0072 E18.5 retina CTGCAAGGGT (2) GGCAACTTTG (6) TGTGTGACAG (2) 7.2 0.0072 P0.5 retina AACAAGGGCC ATACTTCCAC (2) CTGCAAGGGT (2) GGCAACTTTG (6) 13.8 0.0138 P2.5 retina ATACTTCCAC (2) CTGCAAGGGT (2) TGTGTGACAG (2) 7.1 0.0071 P4.5 retina ATACTTCCAC (2) CAAAGAAGCA (2) CTGCAAGGGT (2) 6 0.006 P6.5 retina ATACTTCCAC (2) CAAAGAAGCA (2) CTGCAAGGGT (2) 11.6 0.0116 P10.5 crx- retina CTGCAAGGGT (2) 1.9 0.0019 P10.5 crx+ retina CTGCAAGGGT (2) TGTGTGACAG (2) 3.8 0.0038 Adult retinal ATACTTCCAC (2) CTGCAAGGGT (2) GGCAACTTTG (6) 9.3 0.0093 ONL CTGCAAGGGT (2) 1.9 0.0019