Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271923	C77691	expressed sequence C77691	5		97222
Mm.271923	Gtf3c2	general transcription factor IIIC, polypeptide 2, beta	5		71752
Gene Ontology	nucleus | transcription
Human Homolog	GTF3C2[general transcription factor IIIC, polypeptide 2, beta 110kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGCTCCTG (2) CAGTTATAAA (5) GCTCACAAGA (2) TGTTCCCAAG (2) TTTAAACTCT (2) 37.4 0.0374 Cb medulloblastoma CAGTTATAAA (5) GCTCACAAGA (2) 97.1 0.0971 P8 GC+1d culture AAGGCTCCTG (2) CAGTTATAAA (5) TGTTCCCAAG (2) TTTAAACTCT (2) 52.5 0.0525 P8 GC+SHH+1d culture AAGGCTCCTG (2) CAGTTATAAA (5) GCTCACAAGA (2) GTAGTTTTCT (2) TCCAGCCCTT (2) TTTAAACTCT (2) 41.1 0.0411 E15 cortex ATGGTGGTAG (2) GCTCACAAGA (2) 14.8 0.0148 P1 cortex AAGGCTCCTG (2) CAGTTATAAA (5) TTTAAACTCT (2) 22.7 0.0227 Hypothalamus CAGTTATAAA (5) GTAGTTTTCT (2) 45.3 0.0453 E12.5 retina CAGTTATAAA (5) TGTTCCCAAG (2) TTTAAACTCT (2) 13.2 0.0132 E14.5 retina GCTCACAAGA (2) TGTTCCCAAG (2) TTTAAACTCT (2) 5.4 0.0054 E16.5 retina CAGTTATAAA (5) GCTCACAAGA (2) TCCAGCCCTT (2) TGTTCCCAAG (2) TTTAAACTCT (2) 10.8 0.0108 E18.5 retina CAGTTATAAA (5) TGTTCCCAAG (2) TTTAAACTCT (2) 20 0.02 P0.5 retina CAGTTATAAA (5) TTTAAACTCT (2) 7.8 0.0078 P2.5 retina CAGTTATAAA (5) TGTTCCCAAG (2) TTTAAACTCT (2) 15.9 0.0159 P4.5 retina CAGTTATAAA (5) TGTTCCCAAG (2) TTTAAACTCT (2) 17.8 0.0178 P6.5 retina AAGGCTCCTG (2) CAGTTATAAA (5) TCCAGCCCTT (2) TGTTCCCAAG (2) TTTAAACTCT (2) 33.4 0.0334 P10.5 crx- retina AAGGCTCCTG (2) CAGTTATAAA (5) GCTCACAAGA (2) TTTAAACTCT (2) 16.8 0.0168 P10.5 crx+ retina CAGTTATAAA (5) GCTCACAAGA (2) TCCAGCCCTT (2) TTTAAACTCT (2) 19.1 0.0191 Adult retinal AAGGCTCCTG (2) CAGTTATAAA (5) GCTCACAAGA (2) TGTTCCCAAG (2) TTTAAACTCT (2) 22.3 0.0223 ONL AAGGCTCCTG (2) ATGGTGGTAG (2) CAGTTATAAA (5) GTAGTTTTCT (2) TCCAGCCCTT (2) 19.1 0.0191