Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273538	Tubb5	tubulin, beta 5	17	17 B1	22154
Gene Ontology	microtubule | microtubule-based process | structural constituent of cytoskeleton
Human Homolog	OK/SW-cl.56[beta 5-tubulin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 164 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACGACCTCG AAGGAGGTGG (2) AGGGAAATCG CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACTC GCAGGCATTC (2) GGCACCCTGC GGCACCTGCT GGGCAGAGGT TGCCAGGCAC 748.8 0.7488 Cb medulloblastoma GAAAGCACTC (2) GCAGGCACCC (2) GCAGGCACTC GCAGGCATTC (2) TGCCAGGCAC 94.7 0.0947 P8 GC+1d culture AACGACCTCG AAGGAGGTGG (2) AGGGAAATCG CCAGAGCCAG CCCTCACCCG (2) CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACCC (2) GCAGGCACTC GCAGGCATTC (2) GGCACCTGCT GGGCAGAGGT TGCCAGGCAC 521.4 0.5214 P8 GC+SHH+1d culture AACGACCTCG CCAGAGCCAG CTCCTCCTGC (3) GAAAGCACTC (2) GCAAGCACTC GCAGGCACCC (2) GCAGGCACTC GCATCGACCC GGGCAGAGGT TGCCAGGCAC 674.6 0.6746 3T3 fibroblasts CCAGAGCCAG CTCCTCCTGC (3) GCAGGCACTC GCAGGGCACT GGGCAGAGGT TGCCAGGCAC 213.7 0.2137 E15 cortex AGGGAAATCG CTCCTCCTGC (3) GCAAGCACTC GCAGGCACCC (2) GCAGGCACTC GGGCAGAGGT TGCCAGGCAC 529.4 0.5294 P1 cortex AACGACCTCG AAGGAGGTGG (2) CTCCTCCTGC (3) GCAGGCACTC GCAGGCATTC (2) GGCACCTGCT GGGCAGAGGT TGCCAGGCAC 277.2 0.2772 Hypothalamus AACGACCTCG CCAGAGCCAG GAAAGCACTC (2) GCAGGCACTC GGCACCTGCT TGCCAGGCAC 152 0.152 E12.5 retina AACGACCTCG CCCTCACCCG (2) CCTGGCTTTG (3) CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACTC GCAGGCCCTC (2) GGGCAGAGGT TGCCAGGCAC 704.2 0.7042 E14.5 retina AACGACCTCG AAGGAGGTGG (2) CCAGAGCCAG CCCTCACCCG (2) CCTGGCTTTG (3) CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACTC GCAGGCCCTC (2) TGCCAGGCAC 723.2 0.7232 E16.5 retina AACGACCTCG AAGGAGGTGG (2) AGGGAAATCG ATGGCCGCCT CCAGAGCCAG CCCTCACCCG (2) CCTGGCTTTG (3) CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACTC GCAGGCATTC (2) GCATCGACCC GGCACCTGCT TGCCAGGCAC 773.4 0.7734 E18.5 retina AACGACCTCG ATGGCCGCCT CCTGGCTTTG (3) CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACTC GCAGGCCCTC (2) GGGCAGAGGT TGCCAGGCAC 893.1 0.8931 P0.5 retina AACGACCTCG AAGGAGGTGG (2) ATGGCCGCCT CCAGAGCCAG CCCTCACCCG (2) CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACCC (2) GCAGGCACTC GGCACCTGCT TGCCAGGCAC 424 0.424 P2.5 retina AACGACCTCG CCAGAGCCAG CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACTC GCAGGCATTC (2) GCAGGCCCTC (2) GGGCAGAGGT TGCCAGGCAC 480.6 0.4806 P4.5 retina CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACTC GCAGGCCCTC (2) GCAGGGCACT TGCCAGGCAC 344.8 0.3448 P6.5 retina CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACTC GGCACCCTGC TGCCAGGCAC 241.8 0.2418 P10.5 crx- retina AACGACCTCG CCCTCACCCG (2) GAAAGCACTC (2) GCAGGCACCC (2) GCAGGCACTC GCAGGCATTC (2) GCAGGGCACT GGGCAGAGGT TGCCAGGCAC 154.4 0.1544 P10.5 crx+ retina CCCTCACCCG (2) CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACCC (2) GCAGGCACTC GGCACCTGCT TGCCAGGCAC 420.9 0.4209 Adult retinal GAAAGCACTC (2) GCAGGCACTC GCAGGCCCTC (2) TGCCAGGCAC 63 0.063 ONL AAGGAGGTGG (2) CTCCTCCTGC (3) GAAAGCACTC (2) GCAGGCACTC TGCCAGGCAC 80.4 0.0804