Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280233	Ube2b	ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	11		22210
Mm.280233	2610301N02Rik	RIKEN cDNA 2610301N02 gene	11		67159
Mm.280233	5430406J06Rik	RIKEN cDNA 5430406J06 gene	11		73848
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACTCCAC (5) ACAGAATATA (4) GCTAATACTG (4) TAAACTGTAC (3) 13 0.013 Cb medulloblastoma ACAGAATATA (4) GTGTGAACTA (4) 6.9 0.0069 P8 GC+1d culture AAAACTCCAC (5) ACAGAATATA (4) CAATAAAAAG (4) GTGTGAACTA (4) TAAACTGTAC (3) TAATTTCTGA (3) 15.9 0.0159 P8 GC+SHH+1d culture AAAACTCCAC (5) ACAGAATATA (4) CAATAAAAAG (4) CAGTGGAATG (3) GTGTGAACTA (4) TACTGTTTCT (4) 15.4 0.0154 3T3 fibroblasts CAGTGGAATG (3) 3.5 0.0035 E15 cortex ACAGAATATA (4) 4.9 0.0049 P1 cortex ACAGAATATA (4) GCTAATACTG (4) TAAACTGTAC (3) TACTGTTTCT (4) 18 0.018 Hypothalamus ACAGAATATA (4) CAATAAAAAG (4) GTGTGAACTA (4) TAAACTGTAC (3) 10.8 0.0108 E12.5 retina ACAGAATATA (4) CAGTGGAATG (3) 11.3 0.0113 E14.5 retina GCTAATACTG (4) GTGTGAACTA (4) TAAACTGTAC (3) TACTGTTTCT (4) 9 0.009 E16.5 retina ACAGAATATA (4) CAATAAAAAG (4) GTGTGAACTA (4) TAAACTGTAC (3) TACTGTTTCT (4) 29 0.029 E18.5 retina AAAACTCCAC (5) ACAGAATATA (4) CAATAAAAAG (4) GTGTGAACTA (4) 18.2 0.0182 P0.5 retina ACAGAATATA (4) TAAACTGTAC (3) TACTGTTTCT (4) 11.9 0.0119 P2.5 retina ACAGAATATA (4) CAATAAAAAG (4) GTGTGAACTA (4) 10.6 0.0106 P4.5 retina ACAGAATATA (4) GTGTGAACTA (4) TAAACTGTAC (3) TACTGTTTCT (4) 17.9 0.0179 P6.5 retina AAAACTCCAC (5) ACAGAATATA (4) CAATAAAAAG (4) GTGTGAACTA (4) TAAACTGTAC (3) TAATTTCTGA (3) 25.1 0.0251 P10.5 crx- retina AAAACTCCAC (5) ACAGAATATA (4) CAGTGGAATG (3) GTGTGAACTA (4) TAAACTGTAC (3) 16.8 0.0168 P10.5 crx+ retina AAAACTCCAC (5) ACAGAATATA (4) GCTAATACTG (4) GTGTGAACTA (4) TAAACTGTAC (3) TACTGTTTCT (4) 17.2 0.0172 Adult retinal ACAGAATATA (4) CAGTGGAATG (3) TACTGTTTCT (4) 5.7 0.0057 ONL ACAGAATATA (4) TAATTTCTGA (3) 5.7 0.0057