Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280913	1190028F09	hypothetical protein 1190028F09	7		330481
Mm.280913	Ercc1	excision repair cross-complementing rodent repair deficiency, complementation group 1	7	7 4.0 cM	13870
Gene Ontology	damaged DNA binding | DNA binding | DNA repair | endonuclease activity | hydrolase activity | intracellular | nuclease activity | nucleotide excision repair complex | nucleotide-excision repair | nucleus
Human Homolog	ERCC1[excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCAGGCAAA (3) 1.6 0.0016 Cb medulloblastoma CCCAGAAAAA (3) CCCAGGCAAA (3) 6.9 0.0069 P8 GC+1d culture AGGCTGGCCC (3) CCCAGGCAAA (3) 4.5 0.0045 P8 GC+SHH+1d culture CCCAGGCAAA (3) 10.5 0.0105 3T3 fibroblasts AGGCTGGCCC (3) CCCAGGCAAA (3) GAAAATTCTT (3) 10.5 0.0105 P1 cortex CCCAGGCAAA (3) 4.5 0.0045 Hypothalamus CCCAGAAAAA (3) CCCAGGCAAA (3) GAAAATTCTT (3) 5.4 0.0054 E12.5 retina AGGCTGGCCC (3) CCCAGGCAAA (3) 5.7 0.0057 E14.5 retina AGGCTGGCCC (3) CCCAGGCAAA (3) 7.3 0.0073 E16.5 retina CCCAGAAAAA (3) CCCAGGCAAA (3) GAAAATTCTT (3) 7.2 0.0072 E18.5 retina CCCAGGCAAA (3) 5.5 0.0055 P2.5 retina AGGCTGGCCC (3) CCCAGGCAAA (3) 7.1 0.0071 P4.5 retina CCCAGAAAAA (3) CCCAGGCAAA (3) 9.9 0.0099 P6.5 retina CCCAGGCAAA (3) 13.3 0.0133 P10.5 crx- retina CCCAGGCAAA (3) 1.9 0.0019 P10.5 crx+ retina CCCAGGCAAA (3) GAAAATTCTT (3) 9.6 0.0096 Adult retinal AGGCTGGCCC (3) CCCAGAAAAA (3) CCCAGGCAAA (3) 13 0.013 ONL CCCAGGCAAA (3) 1.9 0.0019