Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280968	Cbx3	chromobox homolog 3 (Drosophila HP1 gamma)	6	6 B2.3 (6 26.0 cM)	12417
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | chromatin modification | nucleus | regulation of transcription, DNA-dependent
Human Homolog	CBX3[chromobox homolog 3 (HP1 gamma homolog, Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGTGTCCTC CTTTTTCTTT GTATCAAATA TACAACACTC (3) TTGTATTTCC 26.1 0.0261 Cb medulloblastoma CTTTTTCTTT 4.6 0.0046 P8 GC+1d culture AAGTGTCCTC CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 37.6 0.0376 P8 GC+SHH+1d culture CTTTTTCTTT GTATCAAATA TACAACACTC (3) TTGTATTTCC 29.3 0.0293 3T3 fibroblasts CTTTTTCTTT 3.5 0.0035 E15 cortex TACAACACTC (3) 4.9 0.0049 P1 cortex GTATCAAATA TACAACACTC (3) 45.4 0.0454 Hypothalamus CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 7.2 0.0072 E12.5 retina AAGTGTCCTC CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 22.6 0.0226 E14.5 retina AAGTGTCCTC CTTTTTCTTT TACAACACTC (3) 14.5 0.0145 E16.5 retina CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 21.7 0.0217 E18.5 retina AAGTGTCCTC CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 21.8 0.0218 P0.5 retina AAGTGTCCTC CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 23.6 0.0236 P2.5 retina AAGTGTCCTC CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 35.2 0.0352 P4.5 retina CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 37.7 0.0377 P6.5 retina AAGTGTCCTC CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 11.8 0.0118 P10.5 crx- retina CTTTTTCTTT TACAACACTC (3) 13 0.013 P10.5 crx+ retina CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 9.5 0.0095 Adult retinal CTTTTTCTTT TACAACACTC (3) 11.1 0.0111 ONL CTTTTTCTTT 3.8 0.0038