Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28375	Sec61a1	Sec61 alpha 1 subunit (S. cerevisiae)	6		53421
Gene Ontology	endoplasmic reticulum | integral to membrane | membrane | protein secretion | protein targeting | protein translocase activity | protein transport | transport
Human Homolog	SEC61A1[Sec61 alpha 1 subunit (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAATAAAC (2) 24.5 0.0245 Cb medulloblastoma ACAAATAAAC (2) 18.5 0.0185 P8 GC+1d culture ACAAATAAAC (2) CTACTGTGGC GGATACTTGA 23.9 0.0239 P8 GC+SHH+1d culture ACAAATAAAC (2) ACAAATAAGC (2) CTACTGTGGC CTGGGCTCCT (2) GGATACTTGA TAATTTTTAT (2) 48 0.048 3T3 fibroblasts CTGGGCTCCT (2) 3.5 0.0035 E15 cortex ACAAATAAAC (2) 4.9 0.0049 P1 cortex AAGCCAAACA ACAAATAAAC (2) GAGACTGTCT 18.1 0.0181 Hypothalamus AAGCCAAACA ACAAATAAAC (2) GGATACTTGA TTTTCACTGT 16.2 0.0162 E12.5 retina ACAAATAAAC (2) CTGGGCTCCT (2) GAGACTGTCT GGATACTTGA 41.3 0.0413 E14.5 retina ACAAATAAAC (2) TAATTTTTAT (2) TTTTCACTGT 32.8 0.0328 E16.5 retina ACAAATAAAC (2) ACAAATAAGC (2) CTGGGCTCCT (2) GAGACTGTCT 36.2 0.0362 E18.5 retina ACAAATAAAC (2) CTACTGTGGC GAGACTGTCT TTTTCACTGT 56.3 0.0563 P0.5 retina ACAAATAAAC (2) CTGGGCTCCT (2) GGATACTTGA 23.6 0.0236 P2.5 retina ACAAATAAAC (2) CTGGGCTCCT (2) TTTTCACTGT 24.7 0.0247 P4.5 retina ACAAATAAAC (2) CTACTGTGGC GGATACTTGA TAATTTTTAT (2) 39.7 0.0397 P6.5 retina ACAAATAAAC (2) GGATACTTGA 33.3 0.0333 P10.5 crx- retina ACAAATAAAC (2) TAATTTTTAT (2) TTTTCACTGT 13.1 0.0131 P10.5 crx+ retina ACAAATAAAC (2) ACAAATAAGC (2) GGATACTTGA 24.9 0.0249 Adult retinal AAGCCAAACA ACAAATAAAC (2) CTGGGCTCCT (2) 5.7 0.0057 ONL ACAAATAAAC (2) TTTTCACTGT 5.7 0.0057