| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TGTTTTTCTT (3)
| 4.9 | 0.0049 |
| Cb medulloblastoma | GAAAGAAAGC (2) GCGGGACTCT
| 4.6 | 0.0046 |
| P8 GC+1d culture | CCCCGTCACC (3) TGTTTTTCTT (3)
| 11.4 | 0.0114 |
| P8 GC+SHH+1d culture | CCCCGTCACC (3) GAAAGAAAGC (2) TGTTTTTCTT (3)
| 14.1 | 0.0141 |
| 3T3 fibroblasts | GCGGGACTCT
| 3.5 | 0.0035 |
| E15 cortex | GAAAGAAAGC (2) TGTTTTTCTT (3)
| 9.8 | 0.0098 |
| P1 cortex | GAAAGAAAGC (2) TGTTTTTCTT (3)
| 9 | 0.009 |
| Hypothalamus | TCAGGGAACA
| 1.8 | 0.0018 |
| E12.5 retina | CCCCGTCACC (3) GAAAGAAAGC (2)
| 3.8 | 0.0038 |
| E14.5 retina | CCCCGTCACC (3) GAAAGAAAGC (2) TGTTTTTCTT (3)
| 7.2 | 0.0072 |
| E16.5 retina | GCGGGACTCT TGTTTTTCTT (3)
| 3.6 | 0.0036 |
| E18.5 retina | GAAAGAAAGC (2) TGTTTTTCTT (3)
| 7.3 | 0.0073 |
| P0.5 retina | TGTTTTTCTT (3)
| 7.9 | 0.0079 |
| P2.5 retina | CCCCGTCACC (3) GAAAGAAAGC (2) GCGGGACTCT
| 5.4 | 0.0054 |
| P4.5 retina | GCGGGACTCT
| 2 | 0.002 |
| P6.5 retina | GAAAGAAAGC (2) TCAGGGAACA TGTTTTTCTT (3)
| 6.7 | 0.0067 |
| P10.5 crx- retina | GAAAGAAAGC (2)
| 13 | 0.013 |
| P10.5 crx+ retina | GAAAGAAAGC (2)
| 5.8 | 0.0058 |
| Adult retinal | GAAAGAAAGC (2) GCGGGACTCT
| 13 | 0.013 |
| ONL | GAAAGAAAGC (2) GCGGGACTCT TGTTTTTCTT (3)
| 9.5 | 0.0095 |