| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAGGGTT CAACTCAAAA GATTGATGCA
| 8.1 | 0.0081 |
| Cb medulloblastoma | AACAGTCCCC TCAAAAAAAT TTTTGACTGT
| 11.5 | 0.0115 |
| P8 GC+1d culture | AAAAAGGGTT AACAGTCCCC CTATGTTAAC GATTGATGCA TCAAAAAAAT
| 12.4 | 0.0124 |
| P8 GC+SHH+1d culture | AAAAAGGGTT TTTTGACTGT
| 3.5 | 0.0035 |
| 3T3 fibroblasts | GATTGATGCA TGGCAGATAG (2)
| 14 | 0.014 |
| E15 cortex | AACAGTCCCC GATTGATGCA
| 9.8 | 0.0098 |
| P1 cortex | AAAAAGGGTT GATTGATGCA
| 22.7 | 0.0227 |
| Hypothalamus | AAAAAGGGTT CAACTCAAAA GATTGATGCA TGGCAGATAG (2) TTTTGACTGT
| 9 | 0.009 |
| E12.5 retina | AAAAAGGGTT AACAGTCCCC GATTGATGCA
| 9.5 | 0.0095 |
| E14.5 retina | AAAAAGGGTT CATCCTGGGC CTATGTTAAC GATTGATGCA
| 10.8 | 0.0108 |
| E16.5 retina | GATTGATGCA
| 1.8 | 0.0018 |
| E18.5 retina | GATTGATGCA
| 1.8 | 0.0018 |
| P0.5 retina | AAAAAGGGTT GATTGATGCA
| 5.9 | 0.0059 |
| P2.5 retina | AAAAAGGGTT AACAGTCCCC CATCCTGGGC GATTGATGCA
| 10.6 | 0.0106 |
| P4.5 retina | AAAAAGGGTT GATTGATGCA
| 4 | 0.004 |
| P6.5 retina | CATCCTGGGC CTATGTTAAC
| 3.4 | 0.0034 |
| P10.5 crx- retina | AAAAAGGGTT AACAGTCCCC TGGCAGATAG (2)
| 5.7 | 0.0057 |
| P10.5 crx+ retina | AAAAAGGGTT CAACTCAAAA GATTGATGCA
| 9.5 | 0.0095 |
| Adult retinal | AACAGTCCCC GATTGATGCA
| 7.5 | 0.0075 |
| ONL | CAACTCAAAA
| 1.9 | 0.0019 |