| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCACTCCTGT (3) TAAAGGAGCA TACAGAACAC (2) TGATGTTTGA
| 19.6 | 0.0196 |
| Cb medulloblastoma | CTGGTCTTTG TACAGAACAC (2) TGATGTTTGA
| 16.2 | 0.0162 |
| P8 GC+1d culture | CTGGTCTTTG GCACTCCTGT (3) GTGATGCAGA TAAAGGAGCA TACAGAACAC (2) TGATGTTTGA
| 30.7 | 0.0307 |
| P8 GC+SHH+1d culture | CTGGTCTTTG GCACTCCTGT (3) TAAAGGAGCA TACAGAACAC (2) TGATGTTTGA
| 30.4 | 0.0304 |
| 3T3 fibroblasts | TGATGTTTGA
| 3.5 | 0.0035 |
| E15 cortex | GCACTCCTGT (3) TGATGTTTGA
| 19.8 | 0.0198 |
| P1 cortex | TGATGTTTGA
| 9.1 | 0.0091 |
| Hypothalamus | AGACACTCAG CTGGTCTTTG GCACTCCTGT (3) TACAGAACAC (2) TGATGTTTGA
| 14.4 | 0.0144 |
| E12.5 retina | AGACACTCAG CTGGTCTTTG GCACTCCTGT (3) TACAGAACAC (2) TGATGTTTGA
| 18.9 | 0.0189 |
| E14.5 retina | AACCCAGACT (2) GCACTCCTGT (3) TAAAGGAGCA TGATGTTTGA
| 16.3 | 0.0163 |
| E16.5 retina | ACTTGAGTCC GCACTCCTGT (3) GTGATGCAGA TACAGAACAC (2) TGATGTTTGA
| 16.2 | 0.0162 |
| E18.5 retina | GCACTCCTGT (3) TACAGAACAC (2) TGATGTTTGA TTCTTTTGGG (4)
| 16.3 | 0.0163 |
| P0.5 retina | AACCCAGACT (2) AGACACTCAG CTGGTCTTTG TGATGTTTGA TTCTTTTGGG (4)
| 21.7 | 0.0217 |
| P2.5 retina | CTGGTCTTTG TACAGAACAC (2) TGATGTTTGA
| 26.5 | 0.0265 |
| P4.5 retina | CTGGTCTTTG GCACTCCTGT (3) TACAGAACAC (2) TGATGTTTGA TTCTTTTGGG (4)
| 25.8 | 0.0258 |
| P6.5 retina | AAAAGCAAAG TACAGAACAC (2) TGATGTTTGA TTCTTTTGGG (4)
| 20.1 | 0.0201 |
| P10.5 crx- retina | GCACTCCTGT (3) GTGATGCAGA TGATGTTTGA
| 14.9 | 0.0149 |
| P10.5 crx+ retina | ACTTGAGTCC GTGATGCAGA TACAGAACAC (2) TGATGTTTGA TTCTTTTGGG (4)
| 26.9 | 0.0269 |
| Adult retinal | AAAAGCAAAG TGATGTTTGA
| 14.8 | 0.0148 |
| ONL | AACCCAGACT (2) TGATGTTTGA
| 7.6 | 0.0076 |