| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAATAG (3) AATGATAAAA (2) ATAAAACCCC (2)
| 19.6 | 0.0196 |
| Cb medulloblastoma | AAAAAAATAG (3) AATGATAAAA (2) ATAAAACCCC (2)
| 30 | 0.03 |
| P8 GC+1d culture | AAAAAAATAG (3) AATGATAAAA (2)
| 13.7 | 0.0137 |
| P8 GC+SHH+1d culture | AAAAAAATAG (3) AAGGAAGCTG (3) AATGATAAAA (2) ATAAAACCCC (2) GGCAGGAGCT (3)
| 27 | 0.027 |
| 3T3 fibroblasts | AAGGAAGCTG (3) ATAAAACCCC (2) CGGTCGGCTA (2) CTGGCAGCCT (3)
| 28 | 0.028 |
| E15 cortex | AAAAAAATAG (3) AAGGAAGCTG (3) AATGATAAAA (2) CGGTCGGCTA (2) CTGGCAGCCT (3)
| 24.5 | 0.0245 |
| P1 cortex | AAGGAAGCTG (3) AATGATAAAA (2)
| 9 | 0.009 |
| Hypothalamus | AAAAAAATAG (3) AAGGAAGCTG (3) AATGATAAAA (2) GGCAGGAGCT (3)
| 21.7 | 0.0217 |
| E12.5 retina | AAAAAAATAG (3) AATGATAAAA (2) CTGGCAGCCT (3)
| 20.6 | 0.0206 |
| E14.5 retina | AAAAAAATAG (3) AATGATAAAA (2) CTGGCAGCCT (3) GGCAGGAGCT (3)
| 41.9 | 0.0419 |
| E16.5 retina | AAAAAAATAG (3) AAGGAAGCTG (3) AATGATAAAA (2) GGCAGGAGCT (3)
| 36.2 | 0.0362 |
| E18.5 retina | AAAAAAATAG (3) AATGATAAAA (2)
| 38.2 | 0.0382 |
| P0.5 retina | AAAAAAATAG (3) AATGATAAAA (2)
| 11.8 | 0.0118 |
| P2.5 retina | AAAAAAATAG (3) AAGGAAGCTG (3) AATGATAAAA (2)
| 29.9 | 0.0299 |
| P4.5 retina | AAAAAAATAG (3) AATGATAAAA (2)
| 19.8 | 0.0198 |
| P6.5 retina | AAAAAAATAG (3) AATGATAAAA (2)
| 11.7 | 0.0117 |
| P10.5 crx- retina | AAAAAAATAG (3) AATGATAAAA (2) GGCAGGAGCT (3)
| 14.9 | 0.0149 |
| P10.5 crx+ retina | AAAAAAATAG (3) AATGATAAAA (2) CTGGCAGCCT (3) GGCAGGAGCT (3)
| 9.5 | 0.0095 |
| Adult retinal | AAAAAAATAG (3) AATGATAAAA (2) CTGGCAGCCT (3)
| 5.7 | 0.0057 |
| ONL | AAAAAAATAG (3) AATGATAAAA (2)
| 13.4 | 0.0134 |