Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29984	5730589L02Rik	RIKEN cDNA 5730589L02 gene	7		77582
Gene Ontology	integral to membrane
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (2) 47.3 0.0473 Cb medulloblastoma CAAAAAAAAA (2) GAGGCAGAAG 94.8 0.0948 P8 GC+1d culture ACGCTCACTG AGGAAGAGAA (2) AGGGTGCTGG CAAAAAAAAA (2) GCAGCCGTGG (2) GTCTCTGAAA (2) 47.9 0.0479 P8 GC+SHH+1d culture ACGCTCAAAA ACGCTCACTG AGGGTGCTGG CAAAAAAAAA (2) CTGAAGGAGA (2) GCAGCCGTGG (2) 67.8 0.0678 3T3 fibroblasts AACCAGGCTG (5) AGGGTGCTGG GCAGCCGTGG (2) 10.5 0.0105 E15 cortex ACGCTCACTG AGGGTGCTGG CAAAAAAAAA (2) 44.4 0.0444 P1 cortex AGGAAGAGAA (2) AGGGTGCTGG CAAAAAAAAA (2) 31.7 0.0317 Hypothalamus AGGGTGCTGG CAAAAAAAAA (2) CTGAAGGAGA (2) GCAGCCGTGG (2) GTCTCTGAAA (2) TGTAACACTT (2) 54.2 0.0542 E12.5 retina AGGGTGCTGG CAAAAAAAAA (2) GTCTCTGAAA (2) TGTAACACTT (2) 30.1 0.0301 E14.5 retina ACGCTCAAAA ACGCTCACTG CAAAAAAAAA (2) GAGGCAGAAG 16.3 0.0163 E16.5 retina ACGCTCACTG CAAAAAAAAA (2) CTGAAGGAGA (2) GCAGCCGTGG (2) GTCTCTGAAA (2) 16.3 0.0163 E18.5 retina CAAAAAAAAA (2) 41.8 0.0418 P0.5 retina AGGGTGCTGG CAAAAAAAAA (2) GTCTCTGAAA (2) 145.3 0.1453 P2.5 retina ACGCTCACTG AGGGTGCTGG CAAAAAAAAA (2) 56.4 0.0564 P4.5 retina ACGCTCAAAA ACGCTCACTG CAAAAAAAAA (2) GAGGCAGAAG 55.5 0.0555 P6.5 retina ACGCTCAAAA AGGAAGAGAA (2) CAAAAAAAAA (2) GCAGCCGTGG (2) 36.8 0.0368 P10.5 crx- retina AACCAGGCTG (5) CAAAAAAAAA (2) GTCTCTGAAA (2) 18.6 0.0186 P10.5 crx+ retina ACGCTCACTG CAAAAAAAAA (2) 42.3 0.0423 Adult retinal ACGCTCAAAA ACGCTCACTG CAAAAAAAAA (2) CTGAAGGAGA (2) 27.9 0.0279 ONL AACCAGGCTG (5) ACGCTCAAAA CAAAAAAAAA (2) CTGAAGGAGA (2) 22.9 0.0229