Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30136	Cherp	calcium homeostasis endoplasmic reticulum protein	8	8 34.5 cM	27967
Gene Ontology	calcium ion homeostasis | cytoplasm | molecular_function unknown | negative regulation of cell proliferation
Human Homolog	CHERP[calcium homeostasis endoplasmic reticulum protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) 17.9 0.0179 Cb medulloblastoma CCTCCCAGTG (2) GGGTGCTGGG (2) TGCTGTTAAC (3) 16.1 0.0161 P8 GC+1d culture CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) 26.2 0.0262 P8 GC+SHH+1d culture CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) TGTGTCTGCT 27 0.027 E15 cortex CCTCCCAGTG (2) GAGATGCCGA (3) GTAGCGCACG TGCTGTTAAC (3) 24.6 0.0246 P1 cortex GTAGCGCACG 4.5 0.0045 Hypothalamus CCTCCCAGTG (2) GGGTGCTGGG (2) TGCTGTTAAC (3) 9 0.009 E12.5 retina CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) 9.4 0.0094 E14.5 retina CCAGGTGCTG (2) CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) TGTGTCTGCT 34.5 0.0345 E16.5 retina CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) TGTGTCTGCT 25.3 0.0253 E18.5 retina CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) TGTGTCTGCT 21.8 0.0218 P0.5 retina CCTCCCAGTG (2) GTAGCGCACG TGCTGTTAAC (3) 13.8 0.0138 P2.5 retina CCTCCCAGTG (2) GAGATGCCGA (3) TGCTGTTAAC (3) 19.4 0.0194 P4.5 retina CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) 23.7 0.0237 P6.5 retina CCAGGTGCTG (2) CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) 15.1 0.0151 P10.5 crx- retina CCAGGTGCTG (2) CCTCCCAGTG (2) GAGATGCCGA (3) TGCTGTTAAC (3) 13.1 0.0131 P10.5 crx+ retina CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) 11.5 0.0115 Adult retinal CCAGGTGCTG (2) CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) 26.1 0.0261 ONL GAGATGCCGA (3) GGGTGCTGGG (2) GTAGCGCACG TGTGTCTGCT 9.5 0.0095