| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGTTAAAGA (3)
| 1.6 | 0.0016 |
| Cb medulloblastoma | TCATTTTCCT (4)
| 6.9 | 0.0069 |
| P8 GC+1d culture | AAGTTAAAGA (3) ATCTCTTTTC (5)
| 2.2 | 0.0022 |
| P8 GC+SHH+1d culture | AAGTTAAAGA (3) ATCTCTTTTC (5) CTTTCAGCGT (3)
| 3.6 | 0.0036 |
| 3T3 fibroblasts | AACTTTGACA (4) CTTTCAGCGT (3) GCCGGACCAG (3)
| 10.5 | 0.0105 |
| E15 cortex | TCATTTTCCT (4)
| 4.9 | 0.0049 |
| Hypothalamus | GCCGGACCAG (3) TCATTTTCCT (4)
| 3.6 | 0.0036 |
| E12.5 retina | AAGTTAAAGA (3)
| 1.9 | 0.0019 |
| E14.5 retina | AACTTTGACA (4) TCATTTTCCT (4)
| 3.6 | 0.0036 |
| E16.5 retina | AACTTTGACA (4) TCATTTTCCT (4)
| 3.6 | 0.0036 |
| E18.5 retina | TCATTTTCCT (4)
| 1.8 | 0.0018 |
| P0.5 retina | AACTTTGACA (4)
| 2 | 0.002 |
| P2.5 retina | CTTTCAGCGT (3) GCCGGACCAG (3)
| 3.6 | 0.0036 |
| P4.5 retina | CTTTCAGCGT (3) GCCGGACCAG (3)
| 4 | 0.004 |
| P6.5 retina | ATCTCTTTTC (5) GCCGGACCAG (3) TCATTTTCCT (4)
| 6.7 | 0.0067 |
| P10.5 crx- retina | AACTTTGACA (4) ATCTCTTTTC (5)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | GCCGGACCAG (3)
| 1.9 | 0.0019 |
| Adult retinal | AACTTTGACA (4) ATCTCTTTTC (5)
| 5.6 | 0.0056 |
| ONL | AACTTTGACA (4)
| 1.9 | 0.0019 |