| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATAAAGTTT (2) TACTCTTCCC (2)
| 3.2 | 0.0032 |
| P8 GC+1d culture | AATAAAGTTT (2) CCTTTGGTCC TACTCTTCCC (2)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | AATAAAGTTT (2) CCTTTGGTCC GTGGTGTGGG TACTCTTCCC (2)
| 5.9 | 0.0059 |
| E15 cortex | AATAAAGTTT (2)
| 4.9 | 0.0049 |
| P1 cortex | CCTTTGGTCC
| 4.5 | 0.0045 |
| Hypothalamus | CGCGCGCGCG TACTCTTCCC (2)
| 3.6 | 0.0036 |
| E12.5 retina | TACTCTTCCC (2)
| 3.8 | 0.0038 |
| E14.5 retina | AATAAAGTTT (2) CCTTTGGTCC TACTCTTCCC (2)
| 7.2 | 0.0072 |
| E16.5 retina | AATAAAGTTT (2) CCTTTGGTCC GTGGTGTGGG TACTCTTCCC (2)
| 7.2 | 0.0072 |
| E18.5 retina | AATAAAGTTT (2) TACTCTTCCC (2)
| 5.4 | 0.0054 |
| P0.5 retina | AATAAAGTTT (2) TACTCTTCCC (2)
| 5.9 | 0.0059 |
| P2.5 retina | AATAAAGTTT (2) CCTTTGGTCC GTGGTGTGGG TACTCTTCCC (2)
| 12.4 | 0.0124 |
| P4.5 retina | CGCGCGCGCG TACTCTTCCC (2)
| 4 | 0.004 |
| P6.5 retina | GTGGTGTGGG TACTCTTCCC (2)
| 6.6 | 0.0066 |
| P10.5 crx- retina | CGCGCGCGCG GTGGTGTGGG
| 3.8 | 0.0038 |
| P10.5 crx+ retina | CGCGCGCGCG GTGGTGTGGG TACTCTTCCC (2)
| 5.7 | 0.0057 |
| ONL | AATAAAGTTT (2) CCTTTGGTCC
| 3.8 | 0.0038 |