| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAGTAAAAAA (2) TACAATAAAC (5) TTTGCCATAC
| 11.4 | 0.0114 |
| Cb medulloblastoma | TCCAATCGTA
| 2.3 | 0.0023 |
| P8 GC+1d culture | CAGTAAAAAA (2) TACAATAAAC (5) TTTGCCATAC
| 8 | 0.008 |
| P8 GC+SHH+1d culture | CAGTAAAAAA (2) TACAATAAAC (5) TTTGCCATAC
| 15.3 | 0.0153 |
| Hypothalamus | CAGTAAAAAA (2) TACAATAAAC (5) TCCAATCGTA TTTGCCATAC
| 19.9 | 0.0199 |
| E12.5 retina | TACAATAAAC (5)
| 5.6 | 0.0056 |
| E14.5 retina | TACAATAAAC (5)
| 1.8 | 0.0018 |
| E16.5 retina | CAGTAAAAAA (2) TACAATAAAC (5)
| 5.4 | 0.0054 |
| E18.5 retina | CAGTAAAAAA (2) TACAATAAAC (5) TCCAATCGTA
| 20 | 0.02 |
| P0.5 retina | CAGTAAAAAA (2) TACAATAAAC (5) TTTGCCATAC
| 11.8 | 0.0118 |
| P2.5 retina | CAGTAAAAAA (2) TACAATAAAC (5)
| 10.5 | 0.0105 |
| P4.5 retina | TACAATAAAC (5) TTTGCCATAC
| 15.8 | 0.0158 |
| P6.5 retina | TACAATAAAC (5) TTTGCCATAC
| 10 | 0.01 |
| P10.5 crx- retina | CAGTAAAAAA (2) TTTGCCATAC
| 9.3 | 0.0093 |
| P10.5 crx+ retina | TTTGCCATAC
| 7.7 | 0.0077 |
| Adult retinal | TACAATAAAC (5) TCCAATCGTA
| 7.5 | 0.0075 |
| ONL | TACAATAAAC (5)
| 3.8 | 0.0038 |