Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.565	Sptlc2	serine palmitoyltransferase, long chain base subunit 2	12		20773
Gene Ontology	acyltransferase activity | biosynthesis | endoplasmic reticulum | integral to membrane | metabolism | serine C-palmitoyltransferase activity | transaminase activity | transferase activity
Human Homolog	SPTLC2[serine palmitoyltransferase, long chain base subunit 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAGACAT 1.6 0.0016 Cb medulloblastoma CACTCTGAAA 4.6 0.0046 P8 GC+1d culture CTGGTTGCTG (2) TGAAAGACAT 6.9 0.0069 P8 GC+SHH+1d culture CTGGTTGCTG (2) TGAAAGACAT 3.5 0.0035 3T3 fibroblasts CTGGTTGCTG (2) 3.5 0.0035 P1 cortex TTAAGAAATA (2) 4.5 0.0045 Hypothalamus CTGGTTGCTG (2) GGGCAGGATG (2) TGAAAGACAT TTAAGAAATA (2) 12.6 0.0126 E14.5 retina CTGGTTGCTG (2) TTAAGAAATA (2) 3.6 0.0036 E16.5 retina CTGGTTGCTG (2) TGAAAGACAT 5.4 0.0054 E18.5 retina CACTCTGAAA TGAAAGACAT TTAAGAAATA (2) 7.2 0.0072 P0.5 retina CACTCTGAAA CTGGTTGCTG (2) TTAAGAAATA (2) 6 0.006 P2.5 retina TGAAAGACAT 1.8 0.0018 P4.5 retina TGAAAGACAT 4 0.004 P6.5 retina GGGCAGGATG (2) 1.7 0.0017 P10.5 crx- retina CTGGTTGCTG (2) TGAAAGACAT 11.1 0.0111 P10.5 crx+ retina CACTCTGAAA CTGGTTGCTG (2) GGGCAGGATG (2) 7.6 0.0076 Adult retinal TGAAAGACAT 1.9 0.0019