| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATGCTCTAC (2) TGCAACACTG (3) TTTTGCTACA (3)
| 8.2 | 0.0082 |
| Cb medulloblastoma | GTTTTTGTCT (2) TGCAACACTG (3)
| 4.6 | 0.0046 |
| P8 GC+1d culture | AATGCTCTAC (2) GTTGCACCTG (2) TATGTGTATT (2) TGCAACACTG (3) TTTATATGCA (2) TTTTGCTACA (3)
| 13.6 | 0.0136 |
| P8 GC+SHH+1d culture | GTTTTTAGTT (2) TTTATATGCA (2) TTTTGCTACA (3)
| 7 | 0.007 |
| 3T3 fibroblasts | AATGCTCTAC (2) GAGGGAAAAC (3)
| 7 | 0.007 |
| E15 cortex | AATGCTCTAC (2) GTTTTTGTCT (2) TGCAACACTG (3) TTTTGCTACA (3)
| 19.6 | 0.0196 |
| P1 cortex | GTTGCACCTG (2) TTTTGCTACA (3)
| 9 | 0.009 |
| Hypothalamus | ATCAGCTTTA (3) CTGAGGTCTT (2) GAGGGAAAAC (3) GTTTTTAGTT (2)
| 7.2 | 0.0072 |
| E12.5 retina | AATGCTCTAC (2) ATCAGCTTTA (3) TCAACATTTT (2) TTTTGCTACA (3)
| 7.6 | 0.0076 |
| E14.5 retina | AATGCTCTAC (2) GTTGCACCTG (2) TGCAACACTG (3) TTTTGCTACA (3)
| 12.7 | 0.0127 |
| E16.5 retina | AATGCTCTAC (2) CAGGTGGAAG (2) TATGTGTATT (2) TGCAACACTG (3) TTTTGCTACA (3)
| 12.6 | 0.0126 |
| E18.5 retina | TCAACATTTT (2)
| 1.8 | 0.0018 |
| P0.5 retina | CAGGTGGAAG (2) GAGGGAAAAC (3) GTTTTTGTCT (2) TATGTGTATT (2) TTTTGCTACA (3)
| 10 | 0.01 |
| P2.5 retina | AAAATTAAAA (7) CTGAGGTCTT (2) TTTATATGCA (2) TTTTGCTACA (3)
| 7.2 | 0.0072 |
| P4.5 retina | GTTGCACCTG (2) TTTTGCTACA (3)
| 4 | 0.004 |
| P6.5 retina | AAAATTAAAA (7) CCCAAGTTTT (2) GTTTTTAGTT (2) TCAACATTTT (2) TGCAACACTG (3) TTTTGCTACA (3)
| 11.8 | 0.0118 |
| P10.5 crx- retina | AAAATTAAAA (7) AATGCTCTAC (2) ATCAGCTTTA (3) TTTTGCTACA (3)
| 13.1 | 0.0131 |
| P10.5 crx+ retina | AATGCTCTAC (2) CCCAAGTTTT (2) TTTTGCTACA (3)
| 9.6 | 0.0096 |
| ONL | CCCAAGTTTT (2) GTTGCACCTG (2) TTTTGCTACA (3)
| 7.6 | 0.0076 |