Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.86670	Tbpl1	TATA box binding protein-like 1	10		237336
Gene Ontology	acrosome formation | cytoplasm | DNA binding | dTTP biosynthesis | nucleus | regulation of transcription, DNA-dependent | RNA polymerase II transcription factor activity | spermatogenesis | spermatogenesis | transcription factor TFIID complex | transcription initiation from Pol II promoter
Human Homolog	TBPL1[TBP-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCGAGTCTG TGCACCATAT TTTCTGAACA 9.8 0.0098 Cb medulloblastoma TCCCACAGGC (3) 2.3 0.0023 P8 GC+1d culture GCCGAGTCTG TCCCACAGGC (3) TGCACCATAT 6.8 0.0068 P8 GC+SHH+1d culture GCCGAGTCTG TCCCACAGGC (3) 9.4 0.0094 3T3 fibroblasts GCCGAGTCTG 3.5 0.0035 E15 cortex GCCGAGTCTG 4.9 0.0049 Hypothalamus GCCGAGTCTG 1.8 0.0018 E12.5 retina GCCGAGTCTG TTTCTGAACA 7.6 0.0076 E14.5 retina TCCCACAGGC (3) 1.8 0.0018 E16.5 retina GCCGAGTCTG TCCCACAGGC (3) 5.4 0.0054 E18.5 retina GCCGAGTCTG 1.8 0.0018 P0.5 retina GCCGAGTCTG TCCCACAGGC (3) 7.8 0.0078 P2.5 retina GCCGAGTCTG TTTCTGAACA 3.6 0.0036 P4.5 retina GCCGAGTCTG 4 0.004 P6.5 retina GCCGAGTCTG 10 0.01 P10.5 crx+ retina GCCGAGTCTG TGCACCATAT 7.7 0.0077 Adult retinal GCCGAGTCTG TGCACCATAT 3.8 0.0038