Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.100113	Rnu70	RNA, U70 small nucleolar			104368
Mm.100113	Rpl10	ribosomal protein 10	X	X 29.82 cM	110954
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL10[ribosomal protein L10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTGCTGAGA (2) 55.5 0.0555 P8 Cb GC GGCCGCCGCC (2) 6.5 0.0065 P8 Cb GC ATGACAATAG (2) 1.6 0.0016 P8 Cb GC TCATCCGTAT (2) 1.6 0.0016 P8 Cb GC TCCATCCGAA (2) 1.6 0.0016 P8 Cb GC TGATTGAGGC (2) 1.6 0.0016 Cb medulloblastoma GTTGCTGAGA (2) 9.2 0.0092 P8 GC+1d culture GTTGCTGAGA (2) 81.1 0.0811 P8 GC+1d culture ATGACAATAG (2) 1.1 0.0011 P8 GC+1d culture GAAAGGGTGG (2) 1.1 0.0011 P8 GC+1d culture TATTTGTTGG (2) 1.1 0.0011 P8 GC+1d culture TCATCCGTAT (2) 1.1 0.0011 P8 GC+1d culture TCCATCCGAA (2) 1.1 0.0011 P8 GC+SHH+1d culture GTTGCTGAGA (2) 87.8 0.0878 P8 GC+SHH+1d culture TATTTGTTGG (2) 3.5 0.0035 P8 GC+SHH+1d culture ATGACAATAG (2) 2.3 0.0023 3T3 fibroblasts GTTGCTGAGA (2) 140.2 0.1402 E15 cortex GTTGCTGAGA (2) 113.8 0.1138 P1 cortex GTTGCTGAGA (2) 81.8 0.0818 Hypothalamus GTTGCTGAGA (2) 34.4 0.0344 Hypothalamus TATTTGTTGG (2) 3.6 0.0036 Hypothalamus GTTGCTGAAA (2) 1.8 0.0018 Hypothalamus TCATCCGTAT (2) 1.8 0.0018 Hypothalamus TGATTGAGGC (2) 1.8 0.0018 E12.5 retina GTTGCTGAGA (2) 163.3 0.1633 E12.5 retina ATGACAATAG (2) 5.6 0.0056 E12.5 retina GTTGCTGAAA (2) 3.8 0.0038 E12.5 retina GGCCGCCGCC (2) 1.9 0.0019 E12.5 retina TATTTGTTGG (2) 1.9 0.0019 E14.5 retina GTTGCTGAGA (2) 63.8 0.0638 E14.5 retina TATTTGTTGG (2) 3.6 0.0036 E14.5 retina TCATCCGTAT (2) 3.6 0.0036 E14.5 retina GAAAGGGTGG (2) 1.8 0.0018 E14.5 retina TCCATCCGAA (2) 1.8 0.0018 E14.5 retina TGATTGAGGC (2) 1.8 0.0018 E14.5 retina TTCCTTGTTC (3) 1.8 0.0018 E16.5 retina GTTGCTGAGA (2) 54.3 0.0543 E16.5 retina TTCCTTGTTC (3) 7.2 0.0072 E16.5 retina GTAAAGAGTT (2) 5.4 0.0054 E16.5 retina TATTTGTTGG (2) 3.6 0.0036 E16.5 retina ATGACAATAG (2) 1.8 0.0018 E16.5 retina GAAAGGGTGG (2) 1.8 0.0018 E16.5 retina TCATCCGTAT (2) 1.8 0.0018 E16.5 retina TGATTGAGGC (2) 1.8 0.0018 E18.5 retina GTTGCTGAGA (2) 67.3 0.0673 E18.5 retina GTTGCTGAAA (2) 3.6 0.0036 E18.5 retina TTCCTTGTTC (3) 3.6 0.0036 E18.5 retina ATGACAATAG (2) 1.8 0.0018 P0.5 retina GTTGCTGAGA (2) 92.2 0.0922 P0.5 retina ATGACAATAG (2) 5.9 0.0059 P0.5 retina TGATTGAGGC (2) 3.9 0.0039 P0.5 retina TTCCTTGTTC (3) 3.9 0.0039 P0.5 retina GTTGCTGAAA (2) 2 0.002 P2.5 retina GTTGCTGAGA (2) 49.3 0.0493 P2.5 retina TTCCTTGTTC (3) 5.3 0.0053 P2.5 retina ATGACAATAG (2) 3.5 0.0035 P2.5 retina TGATTGAGGC (2) 1.8 0.0018 P4.5 retina GTTGCTGAGA (2) 39.6 0.0396 P4.5 retina TTCCTTGTTC (3) 5.9 0.0059 P4.5 retina GTTGCTGAAA (2) 2 0.002 P4.5 retina TATTTGTTGG (2) 2 0.002 P6.5 retina GTTGCTGAGA (2) 33.3 0.0333 P6.5 retina TTCCTTGTTC (3) 6.7 0.0067 P6.5 retina ATGACAATAG (2) 3.3 0.0033 P6.5 retina GTTGCTGAAA (2) 1.7 0.0017 P6.5 retina TATTTGTTGG (2) 1.7 0.0017 P10.5 crx- retina GTTGCTGAGA (2) 48.3 0.0483 P10.5 crx- retina GTTGCTGAAA (2) 1.9 0.0019 P10.5 crx- retina TATTTGTTGG (2) 1.9 0.0019 P10.5 crx- retina TCATCCGTAT (2) 1.9 0.0019 P10.5 crx- retina TGATTGAGGC (2) 1.9 0.0019 P10.5 crx+ retina GTTGCTGAGA (2) 38.4 0.0384 P10.5 crx+ retina ATGACAATAG (2) 1.9 0.0019 P10.5 crx+ retina GTTGCTGAAA (2) 1.9 0.0019 Adult retinal GTTGCTGAGA (2) 16.7 0.0167 Adult retinal TATTTGTTGG (2) 1.9 0.0019 Adult retinal TTCCTTGTTC (3) 1.9 0.0019 ONL GTTGCTGAGA (2) 11.5 0.0115 ONL ATGACAATAG (2) 1.9 0.0019 ONL GTTGCTGAAA (2) 1.9 0.0019 ONL TGATTGAGGC (2) 1.9 0.0019